Pairwise Alignments

Query, 322 a.a., glycerol-3-phosphate ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 317 a.a., Putative transmembrane sensor from Variovorax sp. SCN45

 Score =  102 bits (255), Expect = 9e-27
 Identities = 88/314 (28%), Positives = 140/314 (44%), Gaps = 17/314 (5%)

Query: 20  TAMDQALDWLIALQCPQAGQQ--AEFETWLASDPAHVHAFAKAQAAWGG-AP----VHSA 72
           T   +A  W++ L   QA +     F  W A   AH  AF +A+  W   AP    V   
Sbjct: 3   TMQREAQAWVVRLGSQQATEDDALAFRRWCAQSRAHADAFVRAREVWQAMAPAALRVRQQ 62

Query: 73  AVALAAPRKPSAWRRLKPHWKPLATAAVLLI----GLFSFSNLPVRLQADHLTVVGERQR 128
           A   A  R P A RR        A+ A L +    GL++         AD+ T  GE++ 
Sbjct: 63  AEREARRRMPVAGRRALLGGAVAASVAYLAVSPPLGLWASVT---EWGADYRTATGEQRE 119

Query: 129 LQLDDGSKVLLNTNSAFSSNIK-DHQRIARLYQGEAFFDIVPSHGLPLEIDAGPVRASVR 187
           + + DG+ + +NT +  +   + +      L  GEA      S    + + A     S  
Sbjct: 120 VAMADGAVLQMNTQTRVNLQRRGEGGESIELLAGEAEVVTEASAVARVTVAAAGGTVSAV 179

Query: 188 DTAFAVRYLNGEAQVQVQRGDVDLSNTFDDARVRLSAGESIRIGPKGFGQPAKLDANKDL 247
              F +R L+GE  V    G V+++      +VRL  G  +R G  G G  A +D     
Sbjct: 180 RARFNIRNLDGEVCVTCLAGQVEVARGAQ--QVRLDEGRQLRYGAAGLGAVAAVDTGPVS 237

Query: 248 AWVQGRLIFENCPMSEVLAELRRYYPGWIVNTNDQLASVAVTGNYRLDQPLDVVRSLAHI 307
           AW + +L+F   P+SEV+AE+ RY  G +V T++ L    V  ++ +D+  DV   +  +
Sbjct: 238 AWRRRQLVFNQVPLSEVVAEVNRYRHGRLVLTSEALGRSKVQASFSIDRLDDVAMLVRDV 297

Query: 308 TSAKLSEYPSLVIL 321
             A+L++ P  ++L
Sbjct: 298 YGAQLTQLPGGIVL 311