Pairwise Alignments

Query, 322 a.a., glycerol-3-phosphate ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 326 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  112 bits (280), Expect = 1e-29
 Identities = 88/308 (28%), Positives = 144/308 (46%), Gaps = 21/308 (6%)

Query: 17  LQDTAMDQALDWLIAL-QCPQAGQQAEFETWLASDPAHVHAFAKAQAAWGGAPVHSAAVA 75
           + +     AL W   + + P   + A F+ WL +DPAH  A+ +AQ  W  +   +A +A
Sbjct: 7   ITEAQFQAALQWFNRINEQPGQAEGAAFKRWLLADPAHRAAYDQAQVLWQKSAAPAARLA 66

Query: 76  -------------LAAPRKPSAWRRLKPHWKPLATAAVLLIGLFSFSNLPV---RLQADH 119
                        +A P     WRR+      LA   VL +G+    +       LQAD+
Sbjct: 67  DEEQDALQRYLDAMARPPARGGWRRVAG--LALAACLVLAVGVAGGWHPGYWLQDLQADY 124

Query: 120 LTVVGERQRLQLDDGSKVLLNTNSAFSSNIKDHQRIARLYQGEAFFDIVPSHGLPLEIDA 179
            +  G+ +++ L D S+V L+  SA + +    +R  RL  G AFF++  + G P  ++A
Sbjct: 125 SST-GQIRQVILADQSQVTLDAGSAIAVDFAQGERRVRLLHGAAFFEVTHT-GEPFLVEA 182

Query: 180 GPVRASVRDTAFAVRYLNGEAQVQVQRGDVDLSNTFDDARVRLSAGESIRIGPKGFGQPA 239
                 V  T F VR     AQV V+ G V +S         L+A + +       G   
Sbjct: 183 AGGEVRVLGTQFEVREQGEGAQVTVRSGRVGVSPAQGTVARELTANQQLTYRAGRVGDTL 242

Query: 240 KLDANKDLAWVQGRLIFENCPMSEVLAELRRYYPGWIVNTNDQLASVAVTGNYRLDQPLD 299
            +D++  LAW QG L +   P+++V+ +L RYYPG I+  +  L    V+G++ + +PL 
Sbjct: 243 AVDSDNRLAWRQGWLNYYQVPLAQVIDDLGRYYPGRILLLDGDLGQRKVSGSFPVAEPLL 302

Query: 300 VVRSLAHI 307
            + SL  +
Sbjct: 303 ALDSLGKV 310