Pairwise Alignments

Query, 322 a.a., glycerol-3-phosphate ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 335 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score = 92.0 bits (227), Expect = 2e-23
 Identities = 81/319 (25%), Positives = 131/319 (41%), Gaps = 20/319 (6%)

Query: 10  HELAHEVLQDTAMDQALDWLIALQ---CPQAGQQAEFETWLASDPAHVHAFAKAQAAWGG 66
           H+  +    D   D A  W + L    C QA ++A F  WLA+DP H   +      W  
Sbjct: 3   HDRLNPNPDDAITDAAAHWCMRLHAEDCTQAEREA-FADWLAADPRHAEEYQAMLEIWQT 61

Query: 67  APVHSAAVALAAPRKPSAWRRLKPHWKPLATAAVLLIGLFSFSN--------LPVRLQAD 118
           A +   +  +     P+       +W+PLA+AA + + +   +         LP   Q  
Sbjct: 62  ADLLPRSATVIDFNPPARHAARPRNWRPLASAAAIALAVLPLAGWMGWEQGWLPNHYQ-- 119

Query: 119 HLTVVGERQRLQLDDGSKVLLNTNSAFS-SNIKDHQRIARLYQGEAFFDIVPSHGLPLEI 177
           H       Q ++L DGS V LN ++  +  N KD QR   L +GEAFF +      P  +
Sbjct: 120 HFEAGDRMQTVELSDGSTVQLNLHTELTFLNYKD-QRQVTLKRGEAFFKVRHDSSHPFIV 178

Query: 178 DAGPVRASVRDTAFAVRYLNGEAQVQVQRGDVDLSNTFDDARVRLSAGESIRIGPKGFGQ 237
            AG  +  V  T F V     + +V +  G V +S+       RL  G       KG  +
Sbjct: 179 RAGSGQTRVTGTQFNVWKYQDQVKVTLVEGSVLVSSEGSAGGYRLGPGMQASY-HKGDFE 237

Query: 238 P---AKLDANKDLAWVQGRLIFENCPMSEVLAELRRYYPGWIVNTNDQLASVAVTGNYRL 294
           P      D    LAW  G+L+ +N  + + L  + RY    ++  +     + ++G Y  
Sbjct: 238 PQLEQSDDYGNSLAWRSGKLVLDNLSLEQALPVINRYLDAPLLLADASTGRIRISGIYNT 297

Query: 295 DQPLDVVRSLAHITSAKLS 313
            +   +V +L  +    L+
Sbjct: 298 REVGRLVNNLPKVLPVYLT 316