Pairwise Alignments

Query, 322 a.a., glycerol-3-phosphate ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 351 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  399 bits (1025), Expect = e-116
 Identities = 196/319 (61%), Positives = 246/319 (77%), Gaps = 7/319 (2%)

Query: 4   PNKLRPHELAHEVLQDTAMDQALDWLIALQCPQAGQQAEFETWLASDPAHVHAFAKAQAA 63
           P+  RP   A       AMD+ALDWL+ LQC  A     FE WL++ P +  A+ +A+A 
Sbjct: 40  PSPARPDARAR------AMDEALDWLVRLQCADAADTQAFEAWLSAAPENAEAYVEAEAL 93

Query: 64  WGGAPVHSAAVALAAPRKPSAWRRLKPHWKPLATAAVLLIGLFSFSNLPVRLQADHLTVV 123
           W G P+H  A  +   ++ S   RL+ HWKPLATAA+LL+GLF+  NLP+RLQADHLTVV
Sbjct: 94  WNGTPLHKVATHMHQQQRRSWRGRLRSHWKPLATAALLLVGLFTVGNLPMRLQADHLTVV 153

Query: 124 GERQRLQLDDGSKVLLNTNSAFSSNIKDHQRIARLYQGEAFFDIVPSHGLPLEIDAGPVR 183
           GERQRLQL+DG+KVLLNTNSAF+S  +D +++ARL QGEA+F +     LPLE++AGP+R
Sbjct: 154 GERQRLQLEDGAKVLLNTNSAFASERQDGRQVARLLQGEAYFQVPEGAQLPLEVEAGPLR 213

Query: 184 ASVRDTAFAVRYLNGEAQVQVQRGDVDLSNTFDDARVRLSAGESIRIGPKGFGQPAKLDA 243
           A VRDT FAVRYL+GEAQV+VQRGDVDL     D R+RLSAG+SI +GP+GFGQ  + D 
Sbjct: 214 AQVRDTDFAVRYLDGEAQVRVQRGDVDLQGE-RDQRIRLSAGDSISVGPQGFGQRQRPDM 272

Query: 244 NKDLAWVQGRLIFENCPMSEVLAELRRYYPGWIVNTNDQLASVAVTGNYRLDQPLDVVRS 303
           +KDLAW+ GRL+FENCP+S+VLAE++RYYPGWI+N N QL  VAVTGNYRLDQPL+ +R+
Sbjct: 273 HKDLAWIDGRLVFENCPLSQVLAEVQRYYPGWIINRNAQLEHVAVTGNYRLDQPLETLRA 332

Query: 304 LAHITSAKLSEYPSLVILN 322
           LAHITSA+L EYP+LVILN
Sbjct: 333 LAHITSAQLHEYPALVILN 351