Pairwise Alignments

Query, 322 a.a., glycerol-3-phosphate ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 316 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score = 96.7 bits (239), Expect = 7e-25
 Identities = 84/280 (30%), Positives = 133/280 (47%), Gaps = 12/280 (4%)

Query: 22  MDQALDWLIALQ--CPQAGQQAEFETWLASDPAHVHAFAKAQAAW---GGAPVHSAAVAL 76
           +DQA+DWL+ L+   P    + +F+ WLAS P +  A+ +         G P   +   L
Sbjct: 11  VDQAIDWLVKLRFDTPSPRTEQQFQHWLASHPHNRLAWQRVSNLGDELAGLPKDLSRRTL 70

Query: 77  AAPRKPSAWRRLKPHWKPLATAAVL-LIGLFSFSNLPV-RLQADHLTVVGERQRLQLDDG 134
            A + P A RR   H K L   AV   +G  +   L + +L AD  T  GER++ Q  DG
Sbjct: 71  DASQHPKASRR--DHLKLLGLLAVGGSLGWAAREPLGLPQLLADTSTATGERRQWQGSDG 128

Query: 135 SKVLLNTNSAFSSNIKDHQRIARLYQGEAFFDIVPSHGLPLEIDAGPVRASVRDTAFAVR 194
           S++ LNT SA   +    QR  +L  GE   +  P+   P  +       +  D    +R
Sbjct: 129 SRLQLNTASAIDLHYSAEQRQLKLIHGEVSLESNPNDNRPFHVATRVGPLTTFDGQLLLR 188

Query: 195 YLNGEAQVQVQRGDVDLSNTFDDARVRLSAGESIRIGPKGFGQPAKLDANKDLAWVQGRL 254
             +    + V+RG+V L      AR ++  GE++++   G  Q   L  N    W +G L
Sbjct: 189 ENSQGLLLSVRRGEVTLFPASASAR-QVLPGETLQVTADGSIQARTLH-NDPWGWTEGVL 246

Query: 255 IFENCPMSEVLAELRRYYPGWIVNTNDQLASVAVTGNYRL 294
             +  P++E  +EL RY PG ++    ++A + V+G Y+L
Sbjct: 247 SVQQMPLAEFASELGRYRPG-LLRCAPEVAGLKVSGTYQL 285