Pairwise Alignments

Query, 244 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 253 a.a., DNA-binding response regulator from Sphingobium sp. HT1-2

 Score =  177 bits (450), Expect = 1e-49
 Identities = 96/233 (41%), Positives = 141/233 (60%), Gaps = 5/233 (2%)

Query: 8   ILLVDDDQEIRELLQTYLSRAGFQVRGVPDGTGFRQAMNEAPCDLVILDVMLPDEDGFSL 67
           IL+VDDD +IR LL  +L + GF V  V DG    QA+     D+ +LDVM+P EDG S+
Sbjct: 21  ILVVDDDADIRILLSDFLEQHGFAVTAVADGVAMDQALAAQTFDIAVLDVMMPGEDGLSI 80

Query: 68  CRWIRQHPRQAQVPIIMLTASSDEADRVIGLELGADDYIGKPFSPRELQARIKALLRRC- 126
              +R+      +PIIML+A   + DR++GLE+GA+DY+ KP +PREL AR++ +LRR  
Sbjct: 81  ---LRRLAASGDLPIIMLSAIGGDIDRIVGLEMGAEDYLPKPCNPRELLARVRTVLRRNR 137

Query: 127 -QFGQERSSGGEVLVFDEWRLDMISHRLFHVDGEEVILSGADFALLKLFLDHPQQILDRD 185
            Q  + +   G+ L F  W++DM    L   D   V L+  +F LL+ F++HP+++L RD
Sbjct: 138 RQTSEPQVPAGQRLRFAGWQVDMGVRLLTDPDNVVVTLTDGEFRLLRAFIEHPRRVLSRD 197

Query: 186 TIGNATRGRDLMPLDRIVDMAVSRLRQRLRDTEKPPRLIRTVRGSGYQLAASV 238
            + + + G D    DR +D+ VSRLR++L   E    L+RT+R  GY   A V
Sbjct: 198 QLLDYSAGSDAESYDRAIDVQVSRLRRKLERGEMGDELVRTIRNEGYMFTAEV 250