Pairwise Alignments

Query, 244 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 239 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  181 bits (460), Expect = 9e-51
 Identities = 107/241 (44%), Positives = 148/241 (61%), Gaps = 9/241 (3%)

Query: 4   ISKSILLVDDDQEIRELLQTYLSRAGFQVRGVPDGTGFRQAMNEAPCDLVILDVMLPDED 63
           +S ++L+VDDD EIRELL  YL+ AG+ V    DG   R  +     +LV+LD+MLP ED
Sbjct: 1   MSTTLLVVDDDDEIRELLCDYLTDAGYNVLAAADGQQMRDQLARHKVELVVLDLMLPGED 60

Query: 64  GFSLCRWIRQHPRQAQVPIIMLTASSDEADRVIGLELGADDYIGKPFSPRELQARIKALL 123
           G SLCR ++  P  A   +IML+A     DR+IGLE+GADDY+ KPF PREL ARIKA+L
Sbjct: 61  GLSLCRQLQATPGLA---VIMLSAKGSTLDRIIGLEVGADDYLAKPFEPRELIARIKAVL 117

Query: 124 RRCQFGQERSSGGEVLV----FDEWRLDMISHRLFHVDGEEVILSGADFALLKLFLDHPQ 179
           RR Q  +  +S  E +V    F  +RL+ +   L   DGE + L  +D+ +L+  L+   
Sbjct: 118 RRPQ--RLGTSAEEPMVDAQLFAGFRLEHVKRLLTRPDGETLTLPRSDYRVLRELLEANN 175

Query: 180 QILDRDTIGNATRGRDLMPLDRIVDMAVSRLRQRLRDTEKPPRLIRTVRGSGYQLAASVV 239
           +++ RD +  +  GRD +P DR VDM VSRLRQ+LR        I T+R  GY L+ + +
Sbjct: 176 RVVSRDQLTRSAFGRDHLPDDRSVDMCVSRLRQQLRRAPAGTAQILTIRNEGYLLSLAPL 235

Query: 240 A 240
           A
Sbjct: 236 A 236