Pairwise Alignments

Query, 244 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 243 a.a., Two-component system response regulator OmpR from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  187 bits (474), Expect = 2e-52
 Identities = 100/234 (42%), Positives = 147/234 (62%), Gaps = 6/234 (2%)

Query: 2   SVISKSILLVDDDQEIRELLQTYLSRAGFQVRGVPDGTGFRQAMNEAPCDLVILDVMLPD 61
           +V    +L+VDDD  IR+LL+ YL + GF+V    DG    + +     DL++LD+M+P 
Sbjct: 5   TVRPNKVLVVDDDVRIRDLLRRYLMQEGFEVMLAEDGKALNRVLQRDSVDLIVLDLMMPG 64

Query: 62  EDGFSLCRWIRQHPRQAQVPIIMLTASSDEADRVIGLELGADDYIGKPFSPRELQARIKA 121
           EDG S+CR +R +  +   PIIMLTA S++ DR++GLE+GADDY+GKPF+PREL ARI A
Sbjct: 65  EDGLSICRRLRANGDRT--PIIMLTAKSEDVDRIVGLEVGADDYLGKPFNPRELLARIHA 122

Query: 122 LLRR---CQFGQERSSGGEVLVFDEWRLDMISHRLFHVDGEEVILSGADFALLKLFLDHP 178
           +LRR    +     S   EV+ F  +  D +S R    +G ++ L+  +FA+LK  + HP
Sbjct: 123 VLRRRPPTEVPGAPSQDQEVVKFGPFEFD-LSLRTLRKEGADLPLTTGEFAMLKALVRHP 181

Query: 179 QQILDRDTIGNATRGRDLMPLDRIVDMAVSRLRQRLRDTEKPPRLIRTVRGSGY 232
           +Q L R+ +    RGR+  P DR +D+ VSRLR+ + +    PR ++TV G GY
Sbjct: 182 RQPLSREKLAQLARGREFEPFDRSLDVQVSRLRKLIEEDAASPRYLQTVWGVGY 235