Pairwise Alignments

Query, 244 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 246 a.a., Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain from Enterobacter asburiae PDN3

 Score =  214 bits (544), Expect = 2e-60
 Identities = 108/240 (45%), Positives = 161/240 (67%), Gaps = 4/240 (1%)

Query: 8   ILLVDDDQEIRELLQTYLSRAGFQVRGVPDGTGFRQAMNEAPCDLVILDVMLPDEDGFSL 67
           IL+VDDD++IREL+  YL ++G++  G  +G   R  +++   DLV+LDVM+P +DG +L
Sbjct: 7   ILVVDDDRDIRELIVDYLGKSGYRATGAANGKEMRVVLDKQHIDLVVLDVMMPGDDGLTL 66

Query: 68  CRWIRQHPRQAQVPIIMLTASSDEADRVIGLELGADDYIGKPFSPRELQARIKALLRRCQ 127
           CR +R   +   +PI+MLTA ++E DR++GLE+GADDY+ KPF  REL ARIKA+LRR +
Sbjct: 67  CRELRVG-KYKDLPILMLTARNEETDRILGLEMGADDYVVKPFVARELLARIKAILRRFR 125

Query: 128 F---GQERSSGGEVLVFDEWRLDMISHRLFHVDGEEVILSGADFALLKLFLDHPQQILDR 184
                 + +  G +++F EW+LD ++  L   +G  V LSGA++ LL++FLDHPQ++L R
Sbjct: 126 TMPPNLQVTEAGRLVMFGEWQLDTVARHLIDPEGVIVALSGAEYRLLRVFLDHPQRVLTR 185

Query: 185 DTIGNATRGRDLMPLDRIVDMAVSRLRQRLRDTEKPPRLIRTVRGSGYQLAASVVAGNAH 244
           D + N T+GRD    +R +D+ VSR+RQRL +  + P  I+TVR  GY     V    A+
Sbjct: 186 DQLLNLTQGRDAELFERSIDLLVSRVRQRLNEDARTPAYIKTVRSEGYVFTMPVTIKEAN 245