Pairwise Alignments

Query, 309 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 297 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  145 bits (366), Expect = 1e-39
 Identities = 86/247 (34%), Positives = 131/247 (53%), Gaps = 6/247 (2%)

Query: 56  PVLVEPALCILASGSKEVRLADEIFAYDPLNYLVFSVAMPVAGRIIDATPEDPNLSVRIN 115
           P + EP+L  +A GSK   L      Y   +YL+ ++ +P         P+ P L V + 
Sbjct: 47  PQIYEPSLMFVAQGSKVAYLGPRTLEYGAGHYLIQAMPVPFECETFAMAPDAPLLGVTVG 106

Query: 116 IDPAQLTALIA----EAGPMGVPSRPTSRGMYVDRIDNQLLDAVLRLARLLDTPKDIAML 171
           ID   L  L+     +AGP   P+  T   M    +D+ +   V RL + L  P +  ++
Sbjct: 107 IDRVVLGELVMAMGIQAGPP--PTAQTLESMSSVVLDDAMRGCVERLLQCLHDPLESRIM 164

Query: 172 APLINREILYRLLRGPQGYRLYEIAVANSQSHRVSQAITWLNGNYEQPLRIDDLAKAVNL 231
            P   RE+L+  LRGPQ   L  +     Q  R++ ++  L+ +Y +PL I+ LA   ++
Sbjct: 165 GPARVRELLFTALRGPQADVLRALVEQQGQFSRIATSLNHLHAHYAEPLNIETLAGYAHM 224

Query: 232 SVSTLHHRFKAITAMSPLQYQKQLRLQEARRLMIAEGLEASAAGYRVGYESPSQFSREYS 291
           S ST H  FK  T +SP+QY K+LRL +A++L++ EG+  + A + VGY+S SQFSREY 
Sbjct: 225 SASTFHEHFKRCTLLSPVQYLKRLRLLKAQQLLLVEGMGVAQAAHSVGYQSTSQFSREYK 284

Query: 292 RLFGAPP 298
           R F   P
Sbjct: 285 RYFERNP 291