Pairwise Alignments

Query, 309 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 278 a.a., DNA-binding transcriptional activator, L-rhamnose-binding (NCBI) from Escherichia coli BW25113

 Score = 61.6 bits (148), Expect = 2e-14
 Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 2/161 (1%)

Query: 146 RIDNQLLDAVLRLARLLDTPKDIAMLAPLINREILYRLLRGPQGYRLYEIAVANSQSHRV 205
           R+++ +L  V +L   ++  +    L    +REIL+  L         +  + NS S R+
Sbjct: 115 RVNHSVLQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKSSLQENLENSAS-RL 173

Query: 206 SQAITWLNGNYEQPLRIDDLAKAVNLSVSTLHHRFKAITAMSPLQYQKQLRLQEARRLMI 265
           +  + WL  ++   +  D +A   +LS+ TLH + K  T ++P +Y  +LRL +AR L+ 
Sbjct: 174 NLLLAWLEDHFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQRYLNRLRLMKARHLLR 233

Query: 266 AEGLEASAAGYRVGYESPSQFSREYSRLFGAPPLRDLARLR 306
                 +   YR G+   + FS  + R F   P RD+ + R
Sbjct: 234 HSEASVTDIAYRCGFSDSNHFSTLFRREFNWSP-RDIRQGR 273