Pairwise Alignments

Query, 250 a.a., lipopolysaccharide kinase from Pseudomonas simiae WCS417

Subject, 268 a.a., lipopolysaccharide core heptose (I) kinase from Pseudomonas putida KT2440

 Score = 49.7 bits (117), Expect = 6e-11
 Identities = 62/265 (23%), Positives = 101/265 (38%), Gaps = 47/265 (17%)

Query: 17  GLSTFDALWAKQLDAVDEPNTSRGGWSSVFRLELDGQGYYLKRQSNYLTRSLHRPFGEPS 76
           G   FDA+ A Q +   E    R       R E+ G+G+++K         +HR  G   
Sbjct: 15  GRDAFDAVEALQGEVYRELEGRR-----TLRTEVAGEGFFVK---------IHRGIGWGE 60

Query: 77  F--------------SREFRNISRYRKLGIPALQAAFYGERKVD-GEHRAMLLTRALDGW 121
                           +E+R I R  ++G+P + A  YGER  +     + ++T  L   
Sbjct: 61  IFKNLFTAKLPVLGAGQEWRAIQRLHEVGVPTMTAVAYGERGSNPAAQHSFIITEELAPT 120

Query: 122 NDLDSLLEQWAQLSDAQH--RAILLACGQLARRLHSVGQVHGCFYPKHIFLQ----ATGD 175
             L+     W +        RA++    ++   +H  G  H   Y  H  L      T D
Sbjct: 121 ISLEDFSIDWVKQPPEPRLKRALIAEVAKMTGGMHRAGVNHRDCYICHFLLHTDRPVTAD 180

Query: 176 GYVAQLIDLEKTRP---LLFGWRDRVKDLEPLLRRAPQWSDEQVRQL--LAAYLDQP--- 227
            +   +IDL + +    +   WRD  KDL  L   A      Q  +L  L  Y  +P   
Sbjct: 181 DFKLSVIDLHRAQTRARISRRWRD--KDLAALYFSALDIGLTQRDKLRFLRGYFQRPLRQ 238

Query: 228 --EDSALVGTWLQKLTARRSHKENR 250
             +D A +  WL++   +   ++ R
Sbjct: 239 VLKDEAALLAWLERKAQKLYDRKQR 263