Pairwise Alignments

Query, 475 a.a., exonuclease I from Pseudomonas simiae WCS417

Subject, 479 a.a., Exodeoxyribonuclease I (EC 3.1.11.1) from Variovorax sp. SCN45

 Score =  424 bits (1091), Expect = e-123
 Identities = 225/479 (46%), Positives = 299/479 (62%), Gaps = 17/479 (3%)

Query: 3   SIFWYDYETTGINPRSDRPLQVAGIRTDLELNEIGEPVNLYCQPSDDILPHPVACAITGI 62
           +  W+DYET G  PR DRP Q A IRTD ELNE+GEP+ +YC+P+ D LP P AC ITGI
Sbjct: 4   TFLWHDYETFGAVPRRDRPSQFAAIRTDAELNEVGEPLMIYCKPAPDYLPSPEACLITGI 63

Query: 63  TPAILAEKGLAEADFMTRVHAQLAAPGTCGAGYNTLRFDDEMTRYSLYRNFFDPYAREWQ 122
           TP +  E+G+ E +F   +    + PGT G GYNT+RFDDE+TR+  +RN  DPYAREWQ
Sbjct: 64  TPQVCLERGIPEHEFAAHIEQAFSQPGTIGVGYNTIRFDDEVTRFLFWRNLIDPYAREWQ 123

Query: 123 GGNSRWDLIDVIRTAYALRPEGIEWP-QQDGRVTLKLERLTEANGIDHGQAHDALSDVRA 181
               RWDL+DV+R  YALRP+GI+WP ++DG+ + KLE L  ANG+ H  AHDALSDVRA
Sbjct: 124 NDCGRWDLLDVVRLTYALRPDGIQWPKKEDGKPSFKLEDLARANGLLHESAHDALSDVRA 183

Query: 182 TIALARRVREKQPKLYEWLFQLRSKQRVMDQVRL------LQPMVHISGRFSAERHYLGV 235
           TIALAR +R+KQPKL+++ F L  K RV  ++ L       +P +H+SG F  ER  L V
Sbjct: 184 TIALARLIRDKQPKLFDFAFGLHKKDRVAVELGLPAMRETAKPFLHVSGMFPVERGCLAV 243

Query: 236 VLPLAWHPRNRNALIVCDLGLDPQGLLDLDADTLRQRLYTRREDLAEGELPVPLKLVYIN 295
           + PLA HP N+N L+  DL  DP  L D+DADTLR RL+TR  DL EG   +P+K +++N
Sbjct: 244 MWPLASHPTNKNELLAWDLAHDPSELRDIDADTLRLRLFTRTADLPEGVTRIPVKGIHLN 303

Query: 296 RCP-VVAPLNVLRTEDRERLHLDMNIYQERAL---RLTDAQEVWRDKLAAVYAEEGFASS 351
           + P VV  L  L     ER  +D++     A     L D   +W    + VYA      +
Sbjct: 304 KSPMVVGNLRTLAPAMAERWGVDLDTAMRHAAIARDLPDMSAIW----SKVYARPK-EET 358

Query: 352 SDPEQQLYDGFIGDRDRRLCEQVRTAEPAQLARQQWPFDDHRLPELLFRYRARNFPDTLN 411
            D ++ LY GF+G+ DRR   Q+R   P +LA+ +  FDD RL E+LFRYRARN+P+ L+
Sbjct: 359 PDVDEDLYGGFVGNADRRRLNQLRGLSPEELAKDRTGFDDGRLDEILFRYRARNWPELLS 418

Query: 412 SEEQQRWQLFCQQRLSDPEWGAPNTLAAFKQAKQEFAVSATPFQTEVLERWQEYADSLA 470
            EE +RW+     RL   E GA    A F +     + +A     E+L    EYA+++A
Sbjct: 419 EEENERWEALRVARLFKGEGGARTIEALFSEV-DALSENADERGEEILGALYEYAEAIA 476