Pairwise Alignments

Query, 629 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

 Score =  733 bits (1893), Expect = 0.0
 Identities = 381/630 (60%), Positives = 483/630 (76%), Gaps = 3/630 (0%)

Query: 2   NKNLRFSHKILLAASLIVIAAFALFTLYNDYLQRNAIRDDLNNYLQEMGDVTASNIQTWL 61
           N NL+F HKILL+A  +V+ AFALFTLYNDYLQRN IR ++   +Q+ G +TAS++Q W+
Sbjct: 15  NMNLKFRHKILLSACGVVVLAFALFTLYNDYLQRNTIRQNIEASVQQSGALTASSVQNWM 74

Query: 62  GGRIALVENAAQNIAINPEPSAVASLLEQKTLTSSFMATYVGDSKGAFTIRPDTKMPDGF 121
            GRI ++EN AQ+I        +A L+EQ + T +F+ TY+G + G FT RPD +MP G+
Sbjct: 75  SGRILVLENLAQDIGQQGAGDTLAGLIEQPSYTRNFLFTYLGQANGEFTQRPDAQMPAGY 134

Query: 122 DPRVRPWYKGAQSSNGSTLTEPYIDAATGKLIISVATP--STQGTQSIGVVGGDLSLQTL 179
           DPR RPWY  A ++  + LT PY   A G L++++ATP  S +  + IGVVGGD++L TL
Sbjct: 135 DPRQRPWYGAAANAGQTVLTAPY-QGAVGGLMVTIATPVKSKRNGELIGVVGGDVTLDTL 193

Query: 180 VDNIGALNFGGMGYAFLVSADGKVLVHPDKNLVMKTLADVYPKNTPKISADFSEVEANGK 239
           V+ I +++FGG+G+AFL  A+G+V+V P+K+ VMK L D+YP +  +++A   +V  +G+
Sbjct: 194 VEIINSVDFGGIGHAFLADANGQVIVSPNKDQVMKNLKDIYPGSNLRVAAGMQDVTLDGQ 253

Query: 240 DNIVTFIPIKGLPSVNWDLGISVDKDKSFAMLSEFRTSAVIATFIAVVIIIALLGMLIRI 299
           D I++F P+ GLPS  W +G+S+D+DK++A LS+FRTSA+IA  IAV  I  LLG+LI +
Sbjct: 254 DRIISFAPVAGLPSAQWYIGLSIDRDKAYAALSQFRTSAIIAMLIAVAAIAGLLGLLIPV 313

Query: 300 LMQPLHLMTRAMQDIADGEGDLTRRLTIQNHDEFGMLGNAFNRFVERIHTSIREVSSATE 359
           LM PL  M RAM+DIA+GEGDLTRRL +QN DEFG L  +FNRFVERIH SI EVSSAT 
Sbjct: 314 LMSPLTTMGRAMRDIAEGEGDLTRRLAVQNKDEFGELATSFNRFVERIHASISEVSSATR 373

Query: 360 HVNEVALRVVSASNSSMVNSDEQANRTNSVAAAINQLGAAAQEIARNAAQASHQASDARH 419
            V++++ +VVSASN+S++ S+EQ+ RTNSVAAAIN+LGAA QEIARNAA AS  AS A  
Sbjct: 374 LVHDLSEKVVSASNASIIGSEEQSMRTNSVAAAINELGAATQEIARNAADASQHASGASE 433

Query: 420 LAEDGQQVVERNIKAMNQLSSMISASSSNIEALNSKTVNIGQILEVITSISQQTNLLALN 479
            A  G++VVE  I AM  LS  IS S + IE LN+ T  IG+IL+VI  ISQQTNLLALN
Sbjct: 434 QAHGGREVVEEAISAMTALSQRISESCAQIETLNASTDEIGKILDVIKGISQQTNLLALN 493

Query: 480 AAIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQKMIEELQVGARESVSTMGESQRH 539
           AAIEAARAGEAGRGFAVVADEVRNLAHRTQESA+++ +MI  LQVG+RE+V TM  SQ  
Sbjct: 494 AAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHRMITSLQVGSREAVHTMNTSQVS 553

Query: 540 SLESVDIANLAGERLNSVTQRIGEIDGMNQSVATATEEQTSVVESINMDITEINTLNQEG 599
           S ++V +AN AGERL SVTQRIGEIDGMNQSVATATEEQT+VVES+N+DIT+IN LNQ+G
Sbjct: 554 SEQTVQVANQAGERLASVTQRIGEIDGMNQSVATATEEQTAVVESLNLDITQINALNQQG 613

Query: 600 VENLQSTLRACADLEQQAARLKQLVGSFRI 629
           VENL  TLR C  L QQA RLKQLVGSFRI
Sbjct: 614 VENLNETLRHCDQLAQQAGRLKQLVGSFRI 643