Pairwise Alignments

Query, 629 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  253 bits (645), Expect = 2e-71
 Identities = 191/543 (35%), Positives = 286/543 (52%), Gaps = 32/543 (5%)

Query: 103 GDSKGAFTIRPDTKMPDGFDPRVRPWYKGAQSSNGSTL-TEPYIDAATGKLIIS-VATPS 160
           G + G +T  P  +    +DPR RPWY+ A ++ G T+ T  Y  AA   +++S V T +
Sbjct: 119 GVNDGGYTGWPAGQKFVNYDPRTRPWYQLAMANPGKTMRTGAYYWAADDAVLVSTVRTVA 178

Query: 161 TQGTQSIGVVGGDLSLQTLVDNIGALNFGGMGYAFLVSADGKVLVHP-DKNLVMKTLA-- 217
            Q     GVV  D+SL+ L + +  +  G  GY  LV ++G V+V P D     K L   
Sbjct: 179 NQLGNPGGVVNIDVSLKGLTEIVKQIKLGESGYLMLVESNGNVMVDPRDATHNFKQLGSF 238

Query: 218 -DVYPKNTPKISADFSEVEANGKDNIVTFIPIKGLPSVNWD-LGISVDKDKSFAMLSEFR 275
            D Y K   K      EVE NG   +    P + L    W  +G+    ++S  M +  R
Sbjct: 239 GDGYAK-LAKAGKGLVEVELNGVHYMANVYPDQQL---GWTFIGLI---EQSEVMQTTTR 291

Query: 276 TSAVIATFIAVVI--IIALLGMLI-RILMQPLHLMTRAMQDIADGEGDLTRRLTIQNHDE 332
            + +I   IAVV+  + A++G    +++++P++ +T  ++DIA GEGDLTR L I+  DE
Sbjct: 292 LTWLIGV-IAVVLAALFAVVGAAFAKLIVRPINSVTNGLEDIAQGEGDLTRNLEIRGRDE 350

Query: 333 FGMLGNAFNRFVERIHTSIREVSSATEHVNEVALRVVSASNSSM-VNSD------EQANR 385
              L N FN+F+  I + I       +H+   A +++S S+SS  V+SD       Q   
Sbjct: 351 TAQLANWFNQFLGAIRSLI-------QHIGTAASKILSTSSSSTRVSSDMAEAAGRQREA 403

Query: 386 TNSVAAAINQLGAAAQEIARNAAQASHQASDARHLAEDGQQVVERNIKAMNQLSSMISAS 445
            + V+ A +++ A A E+AR+ +QA+  A   +  A +GQQ ++  + ++++LS  I  S
Sbjct: 404 VDMVSTAFHEMVATANEVARSCSQAAQSADSGQQQAREGQQQIDAAVHSVDRLSHEIEQS 463

Query: 446 SSNIEALNSKTVNIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLA 505
           + +I+ L   +  I  IL  I SI++QTNLLALNAAIEAARAGE GRGFAVVADEVR LA
Sbjct: 464 AQSIQQLERDSNAIQSILGTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALA 523

Query: 506 HRTQESAQQVQKMIEELQVGARESVSTMGESQRHSLESVDIANLAGERLNSVTQRIGEID 565
            RT +S  ++  ++  L     E    M  S   S +SV    LA +    + + +  I 
Sbjct: 524 KRTADSTAEIDGLLGNLASRTAEVAEQMHASLEVSQQSVSRIGLARDSFGQIRESVDVIR 583

Query: 566 GMNQSVATATEEQTSVVESINMDITEINTLNQEGVENLQSTLRACADLEQQAARLKQLVG 625
            MN  +ATA EEQ  V E IN  I++I+   Q   E  Q+  +    L   +  L  LV 
Sbjct: 584 DMNTQIATAAEEQHQVAEDINRHISQIHGDAQLVAELAQAARQDSESLAGLSNELDTLVR 643

Query: 626 SFR 628
            FR
Sbjct: 644 RFR 646