Pairwise Alignments

Query, 678 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 553 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  131 bits (330), Expect = 7e-35
 Identities = 131/452 (28%), Positives = 201/452 (44%), Gaps = 72/452 (15%)

Query: 253 QAQGLAEETRHTNRKLELEVQVRSKIEKKLTGFQNYLNSIIDSMPSALIALDEQLYVTQW 312
           Q   LA   R   R  ELE ++ ++ E  +      L  ++D+  + + A D  + +   
Sbjct: 2   QPDTLASFARLQARVAELEARLAAR-EDNVQAHDRLLGELLDNSVANVFAADRSMRLLAI 60

Query: 313 NQEA----SALSGTRLDEALNQPIYLAFQP-----LKPYLPQIRAAVEQHTVERIERVTW 363
           N+ A        G         P +L  QP     L P  P+I A         I+ VT+
Sbjct: 61  NRTARETFERYRGFVPQVGDYVPQFLTDQPDIMGRLAPIWPRILAGEAF-----IDTVTF 115

Query: 364 FKDDEAKHYALTFYPLMGGAGR--GVVIRIDDITQRLS-------LEEMMVQSEKMLSVG 414
             DD  +HY + ++P +    R  G  +   DITQR++        EE + Q++KM +VG
Sbjct: 116 GLDDAPRHYEIRYHPWLDAQQRIQGGYLFAYDITQRVTEQERLQQAEEALRQAQKMEAVG 175

Query: 415 GLAAGMAHEINNPLGAILHNVQNIRRRLSPDLPKNLEHAQQAGIELETVNRYLQSREVPQ 474
            L  G+AH+ NN L +IL  ++   +RL           QQ            +  +  Q
Sbjct: 176 QLTGGIAHDFNNLLASILGALELAGQRL----------VQQ------------RLADTTQ 213

Query: 475 LLDGIQQAGARAAKIVTHMLSFSRRSNRQMAPCDLPALIDQAVEIAGNDFDLAIGFDFKG 534
           LL+  +    RAA +V  +L+FSR+        D+  L+    ++  +     + +  + 
Sbjct: 214 LLELSRHNAQRAAALVQRLLAFSRQQTLVPQRVDVQQLVAGMHDLISSSTGPYVDYHDQT 273

Query: 535 QAIIRQFDPQLGPVPGTANELEQVLLNLLKNAAQAIHL-----------REDDSEPGRII 583
            A        L P+   A +LE  LLNL  NA  A+ L               +E  ++ 
Sbjct: 274 HA-------GLWPIRIDAQQLENALLNLCINARDAMPLGGTLSIGCANVEVQGAEARQLG 326

Query: 584 LRTRLNPPWAEIQVEDNGIGMSENVRKRTFEPFFTTKEIGQGTGLGLSVSYFIITNNHKG 643
           L       +  I+VED G+GMS+ V +R  EPFFTTK +GQGTGLGLS+ Y  +  +  G
Sbjct: 327 LAAGR---FLRIRVEDTGMGMSKAVMQRALEPFFTTKPLGQGTGLGLSMVYGFVRQS-GG 382

Query: 644 QMEVHSTLGQGTCFTLRLP----LAGSQLPPH 671
           Q+ + STLGQGT   L LP    +A +   PH
Sbjct: 383 QLVIDSTLGQGTAINLYLPCDESIAAASPSPH 414