Pairwise Alignments

Query, 280 a.a., mechanosensitive ion channel protein MscS from Pseudomonas simiae WCS417

Subject, 1102 a.a., mechanosensitive channel protein, intermediate (smaller, MscS-like) conductance, K+ efflux from Pseudomonas putida KT2440

 Score = 99.0 bits (245), Expect = 4e-25
 Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 3/217 (1%)

Query: 67   TSLANIALKVMLVVNVASMIGVATTSFVAAIGAATLAIGLALQGSLANFAGGVLILLFRP 126
            T+L +  +  + +V+  S +GV+       + A ++ +G  +Q   ANF  G++IL  RP
Sbjct: 869  TTLLSYTIVGIGIVSTLSTLGVSWDKLQWLVAALSVGLGFGMQEIFANFISGIMILFERP 928

Query: 127  FRIGDWIEAQGTSGTVDSIQIFHTVLRTGDNKTVIIPNGSLSNGLITNTNRQPT-RKVVF 185
             RIGD I     SGTV  I+I  T +   D K +I+PN +   G + N +   T  +V  
Sbjct: 929  VRIGDTITIGNLSGTVSKIRIRATTITDFDRKDIIVPNKTFITGQLINWSLTDTVTRVTL 988

Query: 186  DVGVDYEADLQKAREVLLELA-KDPRVLADPAAVAVVSTLGDSSITVSLRCWTK-TADYW 243
             +G+DY +DL   R++LL+ A ++PRVL DP  +      G+SS+   LR   +   D  
Sbjct: 989  KLGIDYGSDLDLVRDLLLKGAHENPRVLKDPEPIVYFLNFGESSLDHELRMHVRDLGDRN 1048

Query: 244  DVVFMLNELARDRLKAAGIDIPFPQRVIRVMQETVAK 280
              +  +N       KA  I I   Q  + +M    +K
Sbjct: 1049 PTLDEINRYINREFKAHNIKISVRQVEVFLMDAKGSK 1085