Pairwise Alignments

Query, 280 a.a., mechanosensitive ion channel protein MscS from Pseudomonas simiae WCS417

Subject, 343 a.a., low conductance mechanosensitive channel YnaI from Escherichia coli ECRC62

 Score = 87.4 bits (215), Expect = 4e-22
 Identities = 64/261 (24%), Positives = 125/261 (47%), Gaps = 12/261 (4%)

Query: 19  PMIMEYGSRFLLAVVTLAIGWWLINVLTHRVGRLLALRNADLALQHFITSLANIALKVML 78
           P ++++    L+AV+     + LIN    +  +    +  D+     ++ +  I + V+L
Sbjct: 75  PGVIDFICTSLIAVILTIKLFLLINQFEKQQIK----KGRDITSARIMSRIIKITIIVVL 130

Query: 79  VVNVASMIGVATTSFVAAIGAATLAIGLALQGSLANFAGGVLILLFRPFRIGDWIEA--Q 136
           V+      G++ +  +   G   LA+G+A +  L+NF  G+++   RPF IGDWI +  +
Sbjct: 131 VLLYGEHFGMSLSGLLTFGGIGGLAVGMAGKDILSNFFSGIMLYFDRPFSIGDWIRSPDR 190

Query: 137 GTSGTVDSIQIFHTVLRTGDNKTVIIPNGSLSNGLITNTNRQPTRKVVFDVGVDYE--AD 194
              GTV  I    T + T DN+ + +PN   S+  + N  R   R++   +G+ YE  A 
Sbjct: 191 NIEGTVAEIGWRITKITTFDNRPLYVPNSLFSSISVENPGRMTNRRITTTIGLRYEDAAK 250

Query: 195 LQKAREVLLELAKD-PRVLADPAAVAVVSTLGDSSITVSLRCWTKTADYWDVVFMLNEL- 252
           +    E + E+ K+ P +      +   +   DSS+ + + C+TKT  + + +    ++ 
Sbjct: 251 VGVIVEAVREMLKNHPAIDQRQTLLVYFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVY 310

Query: 253 --ARDRLKAAGIDIPFPQRVI 271
               D +++ G D  FP + +
Sbjct: 311 LKIIDIVQSHGADFAFPSQTL 331