Pairwise Alignments

Query, 432 a.a., porin from Pseudomonas simiae WCS417

Subject, 433 a.a., outer-membrane porin D from Pseudomonas putida KT2440

 Score =  227 bits (578), Expect = 6e-64
 Identities = 152/426 (35%), Positives = 218/426 (51%), Gaps = 35/426 (8%)

Query: 23  ASAQSDSKGFVEDSTFSINTRALYFSRDFRNNPSGPGS-QSRAEETGLGFNALYQSGFTQ 81
           A   + + GF+ED++  I  R +YF+RDFR+  S      S+ EE   GF    QSG+TQ
Sbjct: 25  AGVNAQAAGFLEDASAKIEARNVYFNRDFRDGYSSSSQGASKREEWAQGFILNVQSGYTQ 84

Query: 82  GTIGVGVDVIGLLGVKLDSGKGRAGTGLFP-TGSD-GRSQDDYSKGGGAVKFRISDTVLK 139
           G +GVGVD +G+ G KLDS    + +GL P +G D  RS D Y+K G A K ++S+TVLK
Sbjct: 85  GPVGVGVDALGMFGFKLDSSPADSNSGLLPSSGHDPRRSADQYAKMGLAAKVKVSNTVLK 144

Query: 140 VGDQYTTAPVFASDDSRLLPELPQGISITSNEIKGLKLEGGHFTSSVA------------ 187
            G      P+   +D RLLP L  G  +TS E+  LK          A            
Sbjct: 145 YGSMMPDVPLLKYNDGRLLPTLFHGAMLTSEELHDLKFTLARLDKYTARDSTDRQDIRVH 204

Query: 188 -QNQTYHDSLGLTKTDFVGGVYSFTPEFTGSLYYAKTEDYFRKYYSNLNWTHALSDDQSF 246
            +N+ Y         D  G  Y F   F+     AK E+ +R+++  L  +  L    S 
Sbjct: 205 CKNKRYACDTEADHFDLAGVDYRFNERFSAQYQVAKLENIYRQHFLGLVASQPLPVG-SL 263

Query: 247 ALDFNIYDTKSDGEGLQRAYKDNGLPFAERTKLDNRAFSLQGAYTIGAHTFTLAAQKVTG 306
           + D  +   KSD  G  RA            ++D+RAFS    Y++G H  +   Q++ G
Sbjct: 264 SADMRL--IKSDDIGNARA-----------GEIDHRAFSGMLGYSLGGHKLSAGWQRMYG 310

Query: 307 DGDYGYGVDGGGTVFLANSIARSDFNAEGEKSYQARYDINMATFGIPGLSFMTRYVTGSG 366
           +    Y +DG    +L N    +DF A  E+S+Q RYD +    G+PGL+F TRY+ G  
Sbjct: 311 NSAMPY-LDGSNP-YLVNYAQVNDFAAAQERSWQVRYDYDFKALGVPGLTFFTRYINGDN 368

Query: 367 ANTATTS-NGKEWERDIEAKYVIQSGPAKDLSLRIRQATYRSSDGVYYGSSSIDELRLIA 425
                +S  GKEWERD E KY +QSG  KD+S+R+R +TYRS+   +  +  +DE R+I 
Sbjct: 369 IKVPGSSVEGKEWERDTEFKYQVQSGTFKDVSVRLRNSTYRSNYERW--ARDMDETRVIV 426

Query: 426 NYPLNI 431
           +Y  +I
Sbjct: 427 SYNFSI 432