Pairwise Alignments

Query, 432 a.a., porin from Pseudomonas simiae WCS417

Subject, 416 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  221 bits (564), Expect = 3e-62
 Identities = 143/415 (34%), Positives = 211/415 (50%), Gaps = 45/415 (10%)

Query: 31  GFVEDSTFSINTRALYFSRDFRNNPSGPGSQSRAEETGLGFNALYQSGFTQGTIGVGVDV 90
           GF EDS  +++ R  YFSRDF ++  G   QS+AEE   GF   ++SG+T G +G GVD 
Sbjct: 24  GFFEDSKATLSARNYYFSRDF-SDIVGANKQSKAEEWAQGFILDFKSGYTPGPVGFGVDA 82

Query: 91  IGLLGVKLDSGKGRAGTGLFPTGSDGRSQDDYSKGGGAVKFRISDTVLKVGDQYTTAPVF 150
           +GLLG+KLDS   R  TGL P   DGR+ D+YS+     K R+S T L+ G+     PV 
Sbjct: 83  LGLLGIKLDSSPDRTNTGLLPVHGDGRAADEYSRLAPTFKARLSKTELRAGELQPNLPVL 142

Query: 151 ASDDSRLLPELPQGISITSNEIKGLKLEGGHFTSSVAQNQ---------TYHDSLGLTKT 201
              D RLLP   QG+S++S+EI GL ++ GH  S+  +N+           H  +   ++
Sbjct: 143 TFSDIRLLPPTYQGVSLSSSEIDGLTMQAGHLKSTHLRNEGGDGKMNAMLGHVPMRQAES 202

Query: 202 D---FVGGVYSFTP-EFTGSLYYAKTEDYFRKYYSNLNWTHALSDDQSFALDFNIYDTKS 257
           D   +VGG Y+F   + + SL+Y + ED +++ +  L  +  +  D   + +   +  + 
Sbjct: 203 DAFNYVGGDYAFNANQSSVSLWYGQLEDIYQQGFVGLKHSKPVG-DWVLSANLGYFTARE 261

Query: 258 DGEGLQRAYKDNGLPFAERTKLDNRAFSLQGAYTIGAHTFTLAAQKVTGDGDYGYGVDGG 317
            G+ L                +DN+AF        G H+F    Q + GD  +       
Sbjct: 262 QGDAL-------------LGNIDNQAFFSLFTARHGGHSFHAGYQGIYGDSPF------- 301

Query: 318 GTVF-----LANSIARSDFNAEGEKSYQARYDINMATFGIPGLSFMTRYVTGSGANTATT 372
             VF     L N +   +F    E+SYQ RYD N A  G+PGL+   RY+TG+  +T   
Sbjct: 302 PRVFANISPLGNEVPTYEFAYTDERSYQVRYDYNFAAMGVPGLTATVRYITGNNVDTGLG 361

Query: 373 SNGKEWERDIEAKYVIQSGPAKDLSLRIRQATYRSSDGVYYGSSSIDELRLIANY 427
             G++ ERD++  Y +QSG  K L +R+R A  RS+       S IDE RL   Y
Sbjct: 362 YEGRDRERDLDIGYAVQSGALKGLGIRVRNAMARSN-----YRSDIDENRLTLVY 411