Pairwise Alignments

Query, 432 a.a., porin from Pseudomonas simiae WCS417

Subject, 417 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  220 bits (561), Expect = 6e-62
 Identities = 142/394 (36%), Positives = 203/394 (51%), Gaps = 38/394 (9%)

Query: 31  GFVEDSTFSINTRALYFSRDFRNNP-----SGPGSQSRAEETGLGFNALYQSGFTQGTIG 85
           GF+EDS   +  R +YF+ +FR+       +   ++S   E   GF   YQSGFTQGT+G
Sbjct: 25  GFIEDSKLKLQLRNVYFNENFRDEQGMSARAAATAKSERVEWAQGFLLDYQSGFTQGTLG 84

Query: 86  VGVDVIGLLGVKLDSGKGRAGTGLFPTGSDGRSQDDYSKGGGAVKFRISDTVLKVGDQYT 145
           +GVD +GLLGV+LDSG+GR+GTGL P   DGR+ D+++  G   K R+  TV+K G    
Sbjct: 85  LGVDAMGLLGVRLDSGRGRSGTGLLPVHDDGRAADEFASAGITAKARLGSTVVKHGTLLP 144

Query: 146 TAPVFASDDSRLLPELPQGISITSNEIKGLKLEGGH---FTSSVAQNQT--YHDSLGLTK 200
             PV   +D+RLLP+  QG  +TS +I  L L  GH   F    + + T  Y D  G   
Sbjct: 145 KTPVLVYNDARLLPQTYQGTQLTSTDIDNLTLTAGHLDRFKQRDSSDSTGLYLDGYGGPA 204

Query: 201 T---DFVGGVYSFTPEFTGSLYYAKTEDYFRKYYSNLNWTHALSDDQSFALDFNIYDTKS 257
           +    F G  Y+ + +   S ++ + E ++R+ ++ L                 ++D   
Sbjct: 205 SGDFSFAGADYAVSKQLRLSYFHGELEHFYRQDFAGL-----------------VHDLPL 247

Query: 258 DGEGLQ---RAYKDNGLPFAERTKLDNRAFSLQGAYTIGAHTFTLAAQKVTGDGDYGYGV 314
            G  L    R +K      A    +DN  FS Q +Y    HT     Q +  DG+ G   
Sbjct: 248 GGGVLTTDLRYFKSRDSGTAYGGGIDNDMFSGQLSYAHSGHTVGAGYQVL--DGEAGLPY 305

Query: 315 DGGGTVFLANSIARSDFNAEGEKSYQARYDINMATFGIPGLSFMTRYVTGSGANTATTSN 374
             G TV+  +++    F  E EK++ A Y  N A  G+PGL+FMTRY+  SG N  +   
Sbjct: 306 ISGATVYSFSNVGIGKFIEEEEKTWMASYAYNFAAAGVPGLTFMTRYL--SGDNGRSGGE 363

Query: 375 G-KEWERDIEAKYVIQSGPAKDLSLRIRQATYRS 407
           G KEWERD E  YV+Q GP K L +++R   YRS
Sbjct: 364 GIKEWERDAEIAYVVQGGPLKGLGVKLRNYVYRS 397