Pairwise Alignments

Query, 432 a.a., porin from Pseudomonas simiae WCS417

Subject, 418 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  258 bits (659), Expect = 2e-73
 Identities = 166/432 (38%), Positives = 232/432 (53%), Gaps = 38/432 (8%)

Query: 11  LAVSAGTTQFAMASAQSDSKGFVEDSTFSINTRALYFSRDFRNNPSGPGSQSRAEETGLG 70
           LA+S     FA     ++  GF+ED+  ++N R  Y +R+F + P+ P  Q +AEE    
Sbjct: 15  LAMSCALPAFA-----ANEGGFIEDAKATLNLRNFYINRNFVD-PAHP--QGKAEEWTQS 66

Query: 71  FNALYQSGFTQGTIGVGVDVIGLLGVKLDSGKGRAGTGLFPTGSDGRSQDDYSKGGGAVK 130
           F    +SGFTQGT+G GVDV+GL  VKLD GKG   T L P   DGR  DD+ + G A+K
Sbjct: 67  FILDARSGFTQGTVGFGVDVLGLYSVKLDGGKGTTNTHLLPVHGDGRPADDFGRLGVALK 126

Query: 131 FRISDTVLKVGDQYTTAPVFASDDSRLLPELPQGISITSNEIKGLKLEGGHFTSSVAQNQ 190
            ++S+T LKVG+     P+  SDD R LP+  +G  +TS EI GL L  G F  +  +N 
Sbjct: 127 AKLSETELKVGEWMPVLPILRSDDGRSLPQTFRGGQLTSREIAGLTLYAGQFRGNSPRND 186

Query: 191 TYHDSLGLT--------KTDFVGGVYSFTPEFTG-SLYYAKTEDYFRKYYSNLNWTHALS 241
              + + L         + +F GG Y+F  + T   L+ A+ +D +R+ Y NL  +  L 
Sbjct: 187 ASMEDMSLNGKAAFTSDRFNFGGGEYTFNDKRTMIGLWDAQLKDIYRQQYLNLTHSQPLG 246

Query: 242 DDQSFALDFNIYDTKSDGEGLQRAYKDNGLPFAERT-KLDNRAFSLQGAYTIGAHTFTLA 300
            D +   +   +  K DG              AER  KLDNR  S   +     HTF + 
Sbjct: 247 -DWTLGANLGYFIGKEDG--------------AERAGKLDNRTASALLSARYQGHTFYVG 291

Query: 301 AQKVTGDGDYGYGVDGGGTVFLANSIARSDFNAEGEKSYQARYDINMATFGIPGLSFMTR 360
            QKV+GD D    V+G     LAN    S F+   E+S+Q R+D N AT G+PGL+ M R
Sbjct: 292 LQKVSGD-DAWMRVNGTSGGTLANDSYNSSFDNAKERSWQVRHDFNFATVGVPGLTLMNR 350

Query: 361 YVTGSGANTATTSNGKEWERDIEAKYVIQSGPAKDLSLRIRQATYRSSDGVYYGSSSIDE 420
           Y+ G      +  +GKEW R+ E  YV+QSG  KDLSL+ R +T R      + +++ DE
Sbjct: 351 YIKGDNVTVGSVDDGKEWARETELAYVVQSGSFKDLSLKWRNSTMRRD----FSTNAFDE 406

Query: 421 LRLIANYPLNIL 432
            RLI +YPLN+L
Sbjct: 407 NRLIVSYPLNLL 418