Pairwise Alignments

Query, 203 a.a., ATP-dependent DNA helicase RuvA from Pseudomonas simiae WCS417

Subject, 192 a.a., Holliday junction DNA helicase RuvA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  179 bits (454), Expect = 3e-50
 Identities = 95/202 (47%), Positives = 139/202 (68%), Gaps = 12/202 (5%)

Query: 1   MIGRLRGTLAEKQPPHLILDVNGLGYELEVPMTTLYRLPSVGEPITLHTHLVVREDAQLL 60
           MIG+L GTL EK PP ++LD +G+GYE++VPM+T Y LP+ GE + L TH VVREDAQ+L
Sbjct: 1   MIGKLTGTLLEKNPPQILLDCHGVGYEVDVPMSTFYNLPAAGEKVALLTHFVVREDAQIL 60

Query: 61  YGFIGKRDRDFFRELIRLNGVGPKLALALMSSLEVDELVRAVSAQDTSALTKVPGVGKKT 120
           YGF    +R+ FR+LI+++GVGP+ AL+++S + V +L +AVSAQ++  + KVPG+GKKT
Sbjct: 61  YGFGTAPEREAFRQLIKISGVGPRTALSVLSGMSVADLAQAVSAQESGRIVKVPGIGKKT 120

Query: 121 AERLLVELKDRFKAWEVVPSMFALVPNQPDMPAAQVASAESDAVNALISLGYKPQEASKA 180
           AERLL+ELK +  A            N P    AQ +  +SD   AL++LGY  ++A+ A
Sbjct: 121 AERLLLELKGKLGA----------DLNLPGAGPAQ-SDVQSDIQQALMALGYSDKDATAA 169

Query: 181 VSAIKDKNLSAEDMIRRALKGM 202
           + A+  K++   + I+ ALK +
Sbjct: 170 LKAL-PKDVGVSEGIKLALKAL 190