Pairwise Alignments

Query, 203 a.a., ATP-dependent DNA helicase RuvA from Pseudomonas simiae WCS417

Subject, 203 a.a., Holliday junction DNA helicase motor protein (NCBI) from Escherichia coli BW25113

 Score =  208 bits (530), Expect = 5e-59
 Identities = 107/205 (52%), Positives = 142/205 (69%), Gaps = 4/205 (1%)

Query: 1   MIGRLRGTLAEKQPPHLILDVNGLGYELEVPMTTLYRLPSVGEPITLHTHLVVREDAQLL 60
           MIGRLRG + EKQPP ++++V G+GYE+ +PMT  Y LP  G+   + TH VVREDAQLL
Sbjct: 1   MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60

Query: 61  YGFIGKRDRDFFRELIRLNGVGPKLALALMSSLEVDELVRAVSAQDTSALTKVPGVGKKT 120
           YGF  K++R  F+ELI+ NGVGPKLALA++S +   + V AV  ++  AL K+PG+GKKT
Sbjct: 61  YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120

Query: 121 AERLLVELKDRFKA--WEVVPSMFALVPNQPDMPAAQVASAESDAVNALISLGYKPQEAS 178
           AERL+VE+KDRFK    ++      LV   P  PA     AE +AV AL++LGYKPQEAS
Sbjct: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATD--DAEQEAVAALVALGYKPQEAS 178

Query: 179 KAVSAIKDKNLSAEDMIRRALKGMI 203
           + VS I   + S+E +IR AL+  +
Sbjct: 179 RMVSKIARPDASSETLIREALRAAL 203