Pairwise Alignments

Query, 203 a.a., ATP-dependent DNA helicase RuvA from Pseudomonas simiae WCS417

Subject, 204 a.a., Holliday junction branch migration protein RuvA from Dickeya dianthicola 67-19

 Score =  197 bits (501), Expect = 1e-55
 Identities = 102/207 (49%), Positives = 139/207 (67%), Gaps = 7/207 (3%)

Query: 1   MIGRLRGTLAEKQPPHLILDVNGLGYELEVPMTTLYRLPSVGEPITLHTHLVVREDAQLL 60
           MIGRLRG + EKQPP ++++ +G+GYE+ +PMT  Y LP +G+   + TH VVREDAQLL
Sbjct: 1   MIGRLRGIVLEKQPPLVLIEASGVGYEVHMPMTCFYELPDLGQEAVIFTHFVVREDAQLL 60

Query: 61  YGFIGKRDRDFFRELIRLNGVGPKLALALMSSLEVDELVRAVSAQDTSALTKVPGVGKKT 120
           +GF  K++R  FRELI++NGVGPKLALA++S +   + V AV  Q+ + L K+PGVGKKT
Sbjct: 61  FGFNNKQERSLFRELIKVNGVGPKLALAILSGMSAQQFVNAVERQEINTLVKLPGVGKKT 120

Query: 121 AERLLVELKDRFKAWEVVPSMFALVPNQPDMPAAQVASAESD----AVNALISLGYKPQE 176
           AERL+VE+KDRFK    +        +   +PAA  A  E+D    A  AL++LGYKPQE
Sbjct: 121 AERLVVEMKDRFKG---LNGDLFNAASDISLPAAANAEPEADPQAEAEAALVALGYKPQE 177

Query: 177 ASKAVSAIKDKNLSAEDMIRRALKGMI 203
           A + VS +       E +IR AL+  +
Sbjct: 178 AGRMVSNVARPGADCETLIREALRAAL 204