Pairwise Alignments

Query, 203 a.a., ATP-dependent DNA helicase RuvA from Pseudomonas simiae WCS417

Subject, 205 a.a., Holliday junction branch migration protein RuvA from Dickeya dadantii 3937

 Score =  196 bits (499), Expect = 2e-55
 Identities = 99/205 (48%), Positives = 140/205 (68%), Gaps = 2/205 (0%)

Query: 1   MIGRLRGTLAEKQPPHLILDVNGLGYELEVPMTTLYRLPSVGEPITLHTHLVVREDAQLL 60
           MIGRLRG + EKQPP ++++ +G+GYE+ +PMT  Y LP +G+   + TH VVREDAQLL
Sbjct: 1   MIGRLRGIVLEKQPPLVLIEASGVGYEVHMPMTCFYELPDLGQEAVIFTHFVVREDAQLL 60

Query: 61  YGFIGKRDRDFFRELIRLNGVGPKLALALMSSLEVDELVRAVSAQDTSALTKVPGVGKKT 120
           +GF  K++R  FRELI++NGVGPKLALA++S +   + V AV  Q+ +AL K+PGVGKKT
Sbjct: 61  FGFNNKQERSLFRELIKVNGVGPKLALAILSGMSAQQFVSAVERQEINALVKLPGVGKKT 120

Query: 121 AERLLVELKDRFKA--WEVVPSMFALVPNQPDMPAAQVASAESDAVNALISLGYKPQEAS 178
           AERL+VE+KDRFK    ++  +   +   +    A   A  +++A  AL++LGYKPQEA 
Sbjct: 121 AERLVVEMKDRFKGLNGDLFNAASDIALPEAAGKAEPEADPQAEAEAALVALGYKPQEAG 180

Query: 179 KAVSAIKDKNLSAEDMIRRALKGMI 203
           + VS +       E +IR AL+  +
Sbjct: 181 RMVSKVARPGADCETLIREALRAAL 205