Pairwise Alignments

Query, 352 a.a., ATP-dependent DNA helicase RuvB from Pseudomonas simiae WCS417

Subject, 349 a.a., Holliday junction branch migration DNA helicase RuvB from Rhodanobacter sp000427505 FW510-R12

 Score =  455 bits (1170), Expect = e-133
 Identities = 234/347 (67%), Positives = 278/347 (80%), Gaps = 3/347 (0%)

Query: 6   RLIAATGPRDREEVQDRAIRPLSLAEYIGQPTVREQMELFIQAARGRSESLDHTLIFGPP 65
           R+I A    D +E  +  IRP  LAEY+GQ  VREQ+ ++I+AA+ R  +LDH L+FGPP
Sbjct: 5   RIITAAAQLD-DEALEATIRPKRLAEYLGQQAVREQLSIYIEAAKKRGGALDHVLVFGPP 63

Query: 66  GLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAALLTNLEPHDVLFIDEIHRLSPIVEE 125
           GLGKTTL+++IA E+GV+++STSGPVLER GDLAALLTNLE +DVLF+DEIHRLSP+VEE
Sbjct: 64  GLGKTTLSHVIANELGVNLRSTSGPVLERAGDLAALLTNLEANDVLFVDEIHRLSPLVEE 123

Query: 126 VLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQRLEFY 185
           VLYPAMEDFQ+DIMIGEGPAARSIKLDLPPFTL+GATTRAGMLT PLRDRFGIVQRLEFY
Sbjct: 124 VLYPAMEDFQIDIMIGEGPAARSIKLDLPPFTLIGATTRAGMLTAPLRDRFGIVQRLEFY 183

Query: 186 STADLATIVSRSASILGLPLDPEGAFEIARRARGTPRIANRLLRRVRDFAEVRAKGHITK 245
           +  +L  IV R+A ILG+   PEGA EIARR+RGTPRIANRLLRRVRD+AEVRA G IT 
Sbjct: 184 TADELTAIVRRAARILGIVCAPEGAQEIARRSRGTPRIANRLLRRVRDYAEVRAGGEITL 243

Query: 246 AVADLALNLLDVDEHGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIEDVLEPY 305
           A A  AL++L +D  GFD  DRRLL  +IE F GGPVGV+SLAAA+SE+R T+EDV+EPY
Sbjct: 244 AAAQAALDMLKIDPQGFDELDRRLLGLIIENFGGGPVGVESLAAALSEDRGTLEDVVEPY 303

Query: 306 LIQQGYIMRTPRGRVVTRHAYLHFGLNIPSRLGEMPVVDEFLDAVDD 352
           LIQQGY++RT RGR+V+   + H GL  P R  +    D F    DD
Sbjct: 304 LIQQGYLVRTARGRMVSARGWRHLGLVPPPR--QAQAADLFESGADD 348