Pairwise Alignments

Query, 352 a.a., ATP-dependent DNA helicase RuvB from Pseudomonas simiae WCS417

Subject, 343 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Xanthobacter sp. DMC5

 Score =  407 bits (1045), Expect = e-118
 Identities = 201/335 (60%), Positives = 256/335 (76%)

Query: 11  TGPRDREEVQDRAIRPLSLAEYIGQPTVREQMELFIQAARGRSESLDHTLIFGPPGLGKT 70
           +G +  ++  D  +RP  L+E++GQ   R  +E+FI+AAR R E+LDH L  GPPGLGKT
Sbjct: 7   SGEKRGDDAADSTLRPQLLSEFVGQAQARANLEIFIKAARARGEALDHVLFVGPPGLGKT 66

Query: 71  TLANIIAQEMGVSIKSTSGPVLERPGDLAALLTNLEPHDVLFIDEIHRLSPIVEEVLYPA 130
           TLA I+++EMGV  +STSGPV+ + GDLAA+LTNLE  DVLFIDEIHRLSP VEE+LYPA
Sbjct: 67  TLAQIMSREMGVGFRSTSGPVIAKAGDLAAILTNLEERDVLFIDEIHRLSPAVEEILYPA 126

Query: 131 MEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQRLEFYSTADL 190
           MED++LD++IGEGPAARS+K+ LP FTLVGATTR+G+LT PLRDRFGI  RL+FY+  +L
Sbjct: 127 MEDYELDLVIGEGPAARSVKISLPKFTLVGATTRSGLLTTPLRDRFGIPVRLQFYTVEEL 186

Query: 191 ATIVSRSASILGLPLDPEGAFEIARRARGTPRIANRLLRRVRDFAEVRAKGHITKAVADL 250
             IV R A ++G+ + P+GA EIARRARGTPRIA RLLRRVRDFA V     I + +AD 
Sbjct: 187 EKIVVRGARVMGIAIAPDGATEIARRARGTPRIAGRLLRRVRDFALVAEAERIDRKIADR 246

Query: 251 ALNLLDVDEHGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIEDVLEPYLIQQG 310
           AL  L+VD  G D  DRR L  + E + GGPVGVD+LAAA+SE R  IE+++EP+L+QQG
Sbjct: 247 ALLALEVDAAGLDAMDRRYLTVIAEFYGGGPVGVDTLAAALSEPRDAIEEIVEPFLVQQG 306

Query: 311 YIMRTPRGRVVTRHAYLHFGLNIPSRLGEMPVVDE 345
           +I RTPRGR++T  A+ H GL  P  + +MP+ DE
Sbjct: 307 FIQRTPRGRMLTGAAFRHLGLAEPPSVKQMPLFDE 341