Pairwise Alignments

Query, 352 a.a., ATP-dependent DNA helicase RuvB from Pseudomonas simiae WCS417

Subject, 430 a.a., Replication-associated recombination protein RarA from Variovorax sp. SCN45

 Score = 53.9 bits (128), Expect = 8e-12
 Identities = 64/237 (27%), Positives = 102/237 (43%), Gaps = 39/237 (16%)

Query: 24  IRPLSLAEYIGQP-TVREQMELFIQAARGRSESLDHTLIFGPPGLGKTTLANIIAQEMG- 81
           +RP +L E IGQ   +   M L I    G+  S    +++GPPG GKTT+A ++A     
Sbjct: 13  LRPRTLGEVIGQQHLLGPGMSLRIAFESGQPHSC---ILWGPPGTGKTTIARLMADAFDA 69

Query: 82  --VSIKSTSGPV--LERPGDLAALLTN--LEPHDVLFIDEIHRLSPIVEEVLYPAMEDFQ 135
             +SI +  G V  +    DLA    +   +   ++F+DE+HR +   ++   P +E   
Sbjct: 70  QFLSISAVLGGVKDIREAVDLATAARDGLTQQRTIVFVDEVHRFNKSQQDAFLPHVES-- 127

Query: 136 LDIMIGEGPAARSIKLDLPPFTLVGATTR--AGMLTNPLRDRFGIVQRLEFYSTADLATI 193
                               FT +GATT   +  + + L  R   V  L+  +  DL  I
Sbjct: 128 ------------------GLFTFIGATTENPSFEVNSALLSR-AAVYVLQSLNEDDLKQI 168

Query: 194 VSRSASILGLP-LDPEGAFEIARRARGTPRIANRLLRRVRDFAEVRAKGHITKAVAD 249
           V+R+  I  +P +D      +   A G    A RLL  +   A V A+      ++D
Sbjct: 169 VTRAQDIQAVPAIDTAAVDRLVAYADGD---ARRLLNTLETLA-VAARAEKLSNISD 221