Pairwise Alignments

Query, 277 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 268 a.a., periplasmic subunit of the TolQRA transport system from Pseudomonas putida KT2440

 Score =  422 bits (1085), Expect = e-123
 Identities = 220/277 (79%), Positives = 239/277 (86%), Gaps = 9/277 (3%)

Query: 1   MRTCRRALTVLALSLAPLAVWAAVPVEDSNSGYTNSGSSYPPAGYGTNGAYAGGAATSAP 60
           MR CRR +TVLALSL PLA WA VPV D N+G      SYPPAGYGT+GAYAG  A++  
Sbjct: 1   MRMCRRVVTVLALSL-PLAAWAEVPVVDDNAG------SYPPAGYGTSGAYAGSGASAPA 53

Query: 61  SAQGELFNQLQRMQDQIAQQQGAIEVLQNQVNQLKQEGLERYQDLDRRIGAGVQPAATPD 120
           SAQG+LF QLQ+MQDQ+++QQG IE LQN V+++KQE LERYQDLDRRI +G  PAATPD
Sbjct: 54  SAQGQLFMQLQQMQDQLSRQQGIIEELQNDVSRMKQENLERYQDLDRRINSGAAPAATPD 113

Query: 121 NSSAGGAPSAAAGGAAAGAAASQAPAASSEPGDPAKEKLYYDAAFDLIKAKDFDKASQAF 180
           NSS GGA S AA  AAAGAAA Q PA SS+PGDPAKEKLYYDAAFDLIK KDFDKASQAF
Sbjct: 114 NSSGGGA-SNAAPDAAAGAAAQQ-PAGSSQPGDPAKEKLYYDAAFDLIKQKDFDKASQAF 171

Query: 181 TAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQGAGQAFAKVSQLYPKHAKVPDSLYKLADV 240
            AFLRKYPNSQYAGNAQYWLGEVNLAKGDLQGA QAFA+VSQ YPKH+KVPDSLYKLADV
Sbjct: 172 NAFLRKYPNSQYAGNAQYWLGEVNLAKGDLQGASQAFAQVSQKYPKHSKVPDSLYKLADV 231

Query: 241 ERRLGHTDKVKGILQQVVAQYPGTSAAQLAQRDLQRL 277
           ERR+GHTDKVKGILQQVV QYPGTSAAQLAQRDLQ+L
Sbjct: 232 ERRMGHTDKVKGILQQVVTQYPGTSAAQLAQRDLQKL 268