Pairwise Alignments

Query, 475 a.a., amino acid APC transporter from Pseudomonas simiae WCS417

Subject, 469 a.a., GABA permease from Pseudomonas simiae WCS417

 Score = 62.8 bits (151), Expect = 2e-14
 Identities = 84/387 (21%), Positives = 167/387 (43%), Gaps = 36/387 (9%)

Query: 3   QPAQKLRLSALIALVVGSMIGGGIFSLPQNMAARAEVGAVLIGWAITAVGMLTLAFVFQT 62
           Q AQ  +   +  L +  +IG G+F +    A  A   AVL+ +  +   ++ +  +   
Sbjct: 12  QLAQGFKPRHVTMLSIAGIIGAGLF-VGSGHAIAAAGPAVLLAYLFSGTLVVLVMRMLGE 70

Query: 63  LANRKPELDSGVYA-YAKAGFGDYMGFSSAWGYWISAWMGNVGYFVLLFS-TLGYFFPIF 120
           +A   P  D+G ++ YA    G + GF+  W YW   W+  +    L     L  +FP  
Sbjct: 71  MAVANP--DTGSFSTYADQAIGRWAGFTIGWLYWWF-WVLVIPIEALAAGHILNQWFP-- 125

Query: 121 GQGNTPVAIGCASLLLWAVHFLVLRGIKEAAFINQIT---TVAKIVPLLMFIVIAGVAFK 177
                   I      L ++  LV+  +   +   +      +AK++ ++ FI +      
Sbjct: 126 -------QIDAWLFALLSIFLLVVTNLFSVSKYGEFEFWFAMAKVIAIIAFIGLGFAVLM 178

Query: 178 AEIFTRDIWGVGNPN------MGNVVDQVRNMMLVTVFVFIGIEGASVYSARAEKRS-DV 230
             I  R++ G+            N +  V    +  +F FIG E  ++ +A +   + ++
Sbjct: 179 GWIPEREVSGLSRLMEEHGGFAPNGLSAVVGAFITIMFSFIGTEAVTIAAAESSNPAQNI 238

Query: 231 GRAT--VIGFLGVLALLVLVNVLSLGIMSQPQLAQLQNPSLAGVLEHIVGPWGAMAISIG 288
            RAT  V+  +GV  LL +  V+S+   + P LA + +   A  L +I  P   + + + 
Sbjct: 239 ARATRSVMWRIGVFYLLSIFVVISVVPWNDPLLASVGSYQRALELMNI--PHAKLLVDVV 296

Query: 289 LAVSLLGALLSWALLCAEILYATAHDKTMPAFLKKENANQVPVNALWLTNVMIQVFLVIT 348
           + +++   + S   + + +L++       PA +KK +A  VP  A+  + ++      +T
Sbjct: 297 VLIAVASCMNSSIYIASRMLFSLGKRGDAPALMKKTSAASVPRAAVIASTIL---GAGVT 353

Query: 349 LFSH----STYTTLIYLASSMILVPYL 371
           LFS+      +  L+  + ++ L+ YL
Sbjct: 354 LFSYFAPAGLFQFLLASSGAIALLVYL 380