Pairwise Alignments

Query, 225 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 239 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  155 bits (391), Expect = 8e-43
 Identities = 98/229 (42%), Positives = 131/229 (57%), Gaps = 8/229 (3%)

Query: 4   LLLIDDDQELCELLTSWLSQEGFQVRACHDGLSARKALADSAPAAVVLDVMLPDGSGLEL 63
           LL++DDD E+ ELL  +L+  G+ V A  DG   R  LA      VVLD+MLP   GL L
Sbjct: 5   LLVVDDDDEIRELLCDYLTDAGYNVLAAADGQQMRDQLARHKVELVVLDLMLPGEDGLSL 64

Query: 64  LKQLRNDHPELPVLMLSARGEPLDRILGLELGADDYLAKPCDPRELTARLRAVLRR---- 119
            +QL+   P L V+MLSA+G  LDRI+GLE+GADDYLAKP +PREL AR++AVLRR    
Sbjct: 65  CRQLQAT-PGLAVIMLSAKGSTLDRIIGLEVGADDYLAKPFEPRELIARIKAVLRRPQRL 123

Query: 120 ---SHPAAVSTQLELGDLCFSPVRGVVSIDEQEFALTVSESRLLEALLRQPGEPLDKQEL 176
              +    V  QL  G       R +   D +   L  S+ R+L  LL      + + +L
Sbjct: 124 GTSAEEPMVDAQLFAGFRLEHVKRLLTRPDGETLTLPRSDYRVLRELLEANNRVVSRDQL 183

Query: 177 AQIALGRKLTLYDRSLDMHVSNLRKKIGPHPDGRPRIVALRSRGYYYSL 225
            + A GR     DRS+DM VS LR+++   P G  +I+ +R+ GY  SL
Sbjct: 184 TRSAFGRDHLPDDRSVDMCVSRLRQQLRRAPAGTAQILTIRNEGYLLSL 232