Pairwise Alignments

Query, 403 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

Subject, 298 a.a., Ribosomal large subunit pseudouridine synthase B from Alteromonas macleodii MIT1002

 Score =  279 bits (713), Expect = 9e-80
 Identities = 144/284 (50%), Positives = 190/284 (66%), Gaps = 10/284 (3%)

Query: 17  EKLQKVLARIGVGSRRDVEAWITQKRIKVNGVEATLGQRVDLHDAITIDGKVIKREEAAE 76
           EKLQKVLA  G+GSRR++E WI + R+ V+G +ATLG RVD    I +DG ++ R+   +
Sbjct: 3   EKLQKVLANQGLGSRREMERWIEEGRVSVDGTKATLGDRVDHTAQIRVDGHLLSRQ-TEQ 61

Query: 77  SVRRVIMYNKPDGEICTRDDPEGRPTVFDKMPKPKEGRWINIGRLDINTTGLLMFTTDGE 136
            + RV+MYNKP+GE+C+R DPEGR TVFD++P  + GRWI +GRLD+NT+GLL+FT DGE
Sbjct: 62  PICRVLMYNKPEGELCSRHDPEGRDTVFDRLPAIRLGRWITVGRLDMNTSGLLLFTNDGE 121

Query: 137 LANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVVLEDGPAKFTDIKQAP-----GGE 191
           LANRLMHP  E++REYAVRV GEV  + +  L+ GV LEDG AKF  I  AP       E
Sbjct: 122 LANRLMHPKCEVEREYAVRVFGEVTGKTLHTLQKGVELEDGEAKFLTISGAPTPQHAEDE 181

Query: 192 GFNHWYHCVVMEGRNREVRRLWESQGLVVSRLKRVRFGPVFLNSDLPMGRWREMSQYEVD 251
             N WY+  + EGRNREVRRLWESQG+ VSRL RV++GP+ L   LP G W E+   +V+
Sbjct: 182 SMNRWYNVTLKEGRNREVRRLWESQGVQVSRLIRVKYGPIELQKRLPQGAWVELGLEDVN 241

Query: 252 ILSAEVGLTPVAMPQMNAK----SKDKLERMQRKSSRPVARTER 291
            L + V L       +N +       +L RM+R   +   R ++
Sbjct: 242 ALRSHVQLPDETQTMVNVRQGKLDHARLSRMRRSVKKHKVRKQQ 285