Pairwise Alignments

Query, 473 a.a., aromatic amino acid transporter from Pseudomonas simiae WCS417

Subject, 472 a.a., L-alanine and D-alanine permease (from data) from Pseudomonas simiae WCS417

 Score =  390 bits (1001), Expect = e-113
 Identities = 197/466 (42%), Positives = 286/466 (61%), Gaps = 12/466 (2%)

Query: 6   SSSGELKRGLKNRHIQLIALGGAIGTGLFLGSAGVLKSAGPSMILGYAICGFIAFMIMRQ 65
           +  G LKR L  RHI+L+ALG  IG GLFLGSA  ++ AGP+++L Y I G    +IMR 
Sbjct: 13  AQGGPLKRELGERHIRLMALGACIGVGLFLGSAKAIEMAGPAIMLSYIIGGLAILVIMRA 72

Query: 66  LGEMIVEEPVAGSFSHFAHKYWGGFAGFLSGWNCWILYILVGMSELTAVGKYVHYWWPEI 125
           LGEM V  PVAGSFS +A  Y G  AGFL+GWN W L+++  ++E+TAV  Y+  W+P+ 
Sbjct: 73  LGEMAVHNPVAGSFSRYAQDYLGPLAGFLTGWNYWFLWLVTCVAEITAVAVYMGVWFPDT 132

Query: 126 PTWVSAAAFFVLINLINLANVKVFGEAEFWFAIIKVVAIVGMIALGSYLLVSGTG--GPQ 183
           P W+ A A  + +  INL  VK FGE EFWFA+IK+V I+ M+  G  ++  G G  G  
Sbjct: 133 PRWIWALAALISMGSINLIAVKAFGEFEFWFALIKIVTIIAMVIGGVGIIAFGFGNDGVA 192

Query: 184 ASVTNLWEHGGFFPHGVGGLVMAMAIIMFSFGGLEMLGFTAAEADKPRTVIPKAINQVIY 243
             ++NLW HGGF P+GV G++M++ ++MF++ G+EM+G TA EA  P+  IP AI  V +
Sbjct: 193 LGISNLWAHGGFMPNGVQGVLMSLQMVMFAYLGVEMIGLTAGEAKNPQKTIPSAIGSVFW 252

Query: 244 RILIFYIGALVVLLSLTPWDSLLATLNASGDAYSGSPFVQVFSMLGSDTAAHILNFVVLT 303
           RIL+FY+GAL V+LS+ PW+ +            GSPFV  F  LG  TAA I+NFVV+T
Sbjct: 253 RILLFYVGALFVILSIYPWNEI---------GTQGSPFVMTFERLGIKTAAGIINFVVIT 303

Query: 304 AALSVYNSGTYCNSRMLLGMAEQGDAPKALAKIDKRGVPVRSILASAAITLVAVLMNYLI 363
           AALS  N G +   RML  +A+ G AP   AK    GVP +++L S    L+ VL+NYL+
Sbjct: 304 AALSSCNGGIFSTGRMLYSLAQNGQAPATFAKTSSNGVPRKALLLSIFALLLGVLLNYLV 363

Query: 364 PQHALELLMSLVVATLVINWAMISFSHFKFRQHMNRTGQVPLFKALW-YPYGNYVCLAFV 422
           P+     + S+     +  W MI  +  KFR+ ++   Q  L   +W YP  +Y+ LAF+
Sbjct: 364 PEKVFVWVTSIATFGAIWTWLMILLAQLKFRKSLSPAEQAGLKYRMWLYPVSSYLALAFL 423

Query: 423 VFILVIMLMIPGIQVSVFAIPVWVMFMAVCYGIKNKRSAQQALAPA 468
           + ++ +M   P  +++++  PV+++ + V + +   +  Q A   A
Sbjct: 424 LLVVGLMAYFPDTRIALYVGPVFLVLLTVLFYVFKLQPTQVAQGEA 469