Pairwise Alignments

Query, 352 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 328 a.a., no description from Variovorax sp. SCN45

 Score =  120 bits (301), Expect = 5e-32
 Identities = 95/302 (31%), Positives = 142/302 (47%), Gaps = 10/302 (3%)

Query: 33  GLDYAALSDPDARFPQDSMTRLWQRAVELSGNPAIGLNMGKVVRPASFHVAGYALMSSNT 92
           GL    L  P  R       RLW       G+P + L + + +   SF    +A + S  
Sbjct: 31  GLPDDLLHQPSVRLASADFYRLWDGIEAAVGDPLLPLRLCQAICSESFSPVLFAALCSPN 90

Query: 93  LAEGFMRLVRYQRIIAESADLSFRLVPEGYALILTVHGDHLPPTRQSAEASLASALALCG 152
           +     R+ RY+ +IA       RL       + T+    L  T     + +   L  C 
Sbjct: 91  MLVAAQRIARYKTLIAP-----MRLDVTQADGLTTLEFSWLDHTVSPPASLVLMELLFCV 145

Query: 153 WLTGR-TLQP-RKVVLQGEQ-PADLAPYKQAFHAPLEFNAPYDALIFERADMDAPLPTAN 209
            L    T +P R VV+Q +  P+ LAPY++   A L   A    + F  AD   P  T+N
Sbjct: 146 TLARMGTREPIRPVVVQAQVLPSPLAPYEEFLGARLTRGARR-LVSFANADAALPFLTSN 204

Query: 210 EAMALLHDRFAGEYLARF-SESRVTHKARQVLCRLLPQGEPKREVVAQALHLSQRTLQRR 268
           E +    +    + L+   +++  T + R  L   LP G    E +A+ L LS+RTLQRR
Sbjct: 205 EPLWAAFEPELRQRLSHLDAQATTTQRVRAALLEGLPSGLVTIEDIARKLALSRRTLQRR 264

Query: 269 LQEEGTSFQTLLDDTRRELAEQYLAQPSMTLLEIAYLLGFADPSNFFRAFRRWFDATPGE 328
           +  EGTSFQ +L+ TR  LA  YL + ++ + EI++LLGF + ++F RAFR W  +TP  
Sbjct: 265 VDAEGTSFQQILNGTREALARHYLEKTALPIAEISFLLGFDESNSFHRAFRGWTGSTPDR 324

Query: 329 YR 330
            R
Sbjct: 325 VR 326