Pairwise Alignments

Query, 352 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 344 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  112 bits (280), Expect = 1e-29
 Identities = 97/335 (28%), Positives = 149/335 (44%), Gaps = 11/335 (3%)

Query: 5   TTSASWAMGIVKALEMDG----LDCRALFKQLGLDYAALSDPDARFPQDSMTRLWQRAVE 60
           T   ++  G++  L   G    +D RA  +  G++ A L  P AR   +    L+   +E
Sbjct: 7   TIPIAFVQGMLSGLLARGQAAPIDARAALEDAGIEPALLEAPGARVTAEQYVALFALLME 66

Query: 61  LSGNPAIGLNMGKVVRPASFHVAGYALMSSNTLAEGFMRLVRYQRIIAESADLSFRLVPE 120
              + A+   + + ++  SF +   A + + T      R+     ++ +  DL+  L+ +
Sbjct: 67  RLDDEALCF-LSRRLKRGSFALMTRATLGAPTFEVALRRVAHTFSLLQD--DLTLVLLQD 123

Query: 121 GYALILTVHGDHLPPTRQSA--EASLASALALCGWLTGRTLQPRKVVLQGEQPADLAPYK 178
           G      +  +     +Q+   E  L     L  WL G  L  R+     E P     Y 
Sbjct: 124 GPLAGFGLRLNDSAAVQQNFLHELMLRVYWRLLAWLHGGRLAARRFDFGFELPPYADGYA 183

Query: 179 QAFHAPLEFNAPYDALIFERADMDAPLPTANEAM-ALLHDRFAGEYLARFSESRVTHKAR 237
           + F  PL+F  P  A+ F+   +  P+    +AM A L    A   L R +E  V+ + R
Sbjct: 184 KVFPGPLQFGQPCTAVWFDAGALQTPVHRDAQAMNAFLAAAPANVILPRLAEQAVSARVR 243

Query: 238 QVLCRLLPQGEPKREVVAQALHLSQRTLQRRLQEEGTSFQTLLDDTRRELAEQYLAQPSM 297
            VL +  P         A +LH+S  TLQR L  EGTSFQ+L D  RR+LA   L   ++
Sbjct: 244 SVLQQNRPAWADLA-TAASSLHMSVSTLQRHLATEGTSFQSLKDQLRRDLAIVRLNTSTV 302

Query: 298 TLLEIAYLLGFADPSNFFRAFRRWFDATPGEYRAR 332
            L  +A  LGFAD + F RAF+ W    PG YR R
Sbjct: 303 PLAALAEELGFADSAAFQRAFKAWTGGAPGSYRRR 337