Pairwise Alignments

Query, 352 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 363 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  117 bits (293), Expect = 5e-31
 Identities = 95/326 (29%), Positives = 149/326 (45%), Gaps = 11/326 (3%)

Query: 15  VKALEMDGLDCRALFKQLGLDYAALSDPDARFPQDSMTRLWQRAVELSGNPAIGLNMGKV 74
           V AL   G     L +  GLD + L     +     M  + + AV LS  P      G+ 
Sbjct: 27  VMALTQSGASASELLRGTGLDESELLSYSRKVSYAQMQTILRNAVALSPGPEAAFEAGRR 86

Query: 75  VRPASFHVAGYALMSSNTLAEGFMRLVRYQRIIAESADLSFRLVPEG----YALILTVHG 130
           V  AS  V G  + S+ T  E    +V+YQ ++       F  V       Y  +L V  
Sbjct: 87  VSLASLGVWGLGMTSARTYRELAEFVVKYQWVLGPMVAFDFHEVDANAWWTYTPLL-VSD 145

Query: 131 DHLPPTRQSAEASLASALALCGWLTGRTLQPRKVVLQGEQPADLAPYKQAFHAPLEFNAP 190
                 + S E +L     +     G   +   + L+ + PA  + Y+  F  P+ F  P
Sbjct: 146 PRSTEYQMSMEFALCMGYRMSEIAFGPGFKALAISLRYDAPAHASLYEHFFGCPILFGQP 205

Query: 191 YDALIFERADMDAPLPTANEAMALLHDRFAGEYLARFSESR--VTHKARQVLCRLLPQGE 248
           +D   F+ A ++  LP AN A+++   R   E L +   +R  +  + R++L    P+ +
Sbjct: 206 HDGFHFDPALLECELPNAN-AISMAMVRAGCEVLLKKLSTRGGIEARVRELLSAQRPE-K 263

Query: 249 PKREV--VAQALHLSQRTLQRRLQEEGTSFQTLLDDTRRELAEQYLAQPSMTLLEIAYLL 306
           P   V  +A  L ++ RTL R+L+E GTSF+ L  +   + A  YL    +T  EIA  L
Sbjct: 264 PALAVDEIANELDMNPRTLHRKLKEAGTSFRGLRSNVLMDQAIAYLRDTDLTQEEIAARL 323

Query: 307 GFADPSNFFRAFRRWFDATPGEYRAR 332
           GF+D SNF +AF+RW +  PG++R +
Sbjct: 324 GFSDGSNFRQAFKRWTNRQPGDFRPK 349