Pairwise Alignments

Query, 352 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 326 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  537 bits (1384), Expect = e-157
 Identities = 267/326 (81%), Positives = 292/326 (89%), Gaps = 1/326 (0%)

Query: 28  LFKQLGLDYAALSDPDARFPQDSMTRLWQRAVELSGNPAIGLNMGKVVRPASFHVAGYAL 87
           +FKQLGLD+AAL DPDARFPQDSMTRLWQ AVELSGN AIGLNM +VVRPASFHV GYAL
Sbjct: 1   MFKQLGLDFAALDDPDARFPQDSMTRLWQLAVELSGNEAIGLNMARVVRPASFHVVGYAL 60

Query: 88  MSSNTLAEGFMRLVRYQRIIAESADLSFRLVPEGYALILTVHGDHLPPTRQSAEASLASA 147
           MSS TLAEGF RLVRYQRIIAES+DLSF L PEGY+LILTVHGDHLPPTR SAEASLA A
Sbjct: 61  MSSRTLAEGFERLVRYQRIIAESSDLSFVLGPEGYSLILTVHGDHLPPTRHSAEASLACA 120

Query: 148 LALCGWLTGRTLQPRKVVLQGEQPADLAPYKQAFHAPLEFNAPYDALIFERADMDAPLPT 207
           LALC WL+GR +QPR+V++QG QP ++ PYK AFH+PL F AP+DAL+FERADM+APLPT
Sbjct: 121 LALCKWLSGRPVQPRRVLVQGPQPKNVEPYKVAFHSPLVFGAPHDALVFERADMEAPLPT 180

Query: 208 ANEAMALLHDRFAGEYLARFSESRVTHKARQVLCRLLPQGEPKREVVAQALHLSQRTLQR 267
           ANEAMA+LHDRFAGEYLARFSESRV+H+ RQVLCR+LPQGEPKRE +AQALHLSQRTLQR
Sbjct: 181 ANEAMAVLHDRFAGEYLARFSESRVSHRVRQVLCRILPQGEPKRETLAQALHLSQRTLQR 240

Query: 268 RLQEEGTSFQTLLDDTRRELAEQYLAQPSMTLLEIAYLLGFADPSNFFRAFRRWFDATPG 327
           RLQEEGTSFQTLLDDTRRELAEQYLAQP MTLLE AYLLGFADPSNF+RAFRRWFDATP 
Sbjct: 241 RLQEEGTSFQTLLDDTRRELAEQYLAQPGMTLLETAYLLGFADPSNFYRAFRRWFDATPS 300

Query: 328 EYRARL-LDASSVSGAKTPECTEQRP 352
           EYRARL  +   +S A+TP CT   P
Sbjct: 301 EYRARLGAEGEVLSDARTPACTTPTP 326