Pairwise Alignments

Query, 352 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 341 a.a., transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  117 bits (292), Expect = 6e-31
 Identities = 88/331 (26%), Positives = 152/331 (45%), Gaps = 4/331 (1%)

Query: 5   TTSASWAMGIVKALEMDGLDCRALFKQLGLDYAALSDPDARFPQDSMTRLWQRAVELSGN 64
           TTS S     ++  E+ GLD   +     +D   L    AR P  + +RLW    +L  +
Sbjct: 9   TTSISLVRDALQGAELRGLDVATVLSHAHIDPRLLDQRYARVPAGTFSRLWIALADLLDD 68

Query: 65  PAIGLNMGKVVRPASFHVAGYALMSSNTLAEGFMRLVRYQRIIAESADLSFRLVPEGYAL 124
                +    +R  SF +     +  +T+ +   R++ + R   +    S     E  A+
Sbjct: 69  EFFAAD-SHPLRRGSFKLMAQLALGCDTIGQALKRILAFLRTALDDIYGSVECEGEHAAI 127

Query: 125 ILTVHGDHLPPTRQSAEASLASALALCGWLTGRTLQPRKVVLQGEQPADLAPYKQAFHAP 184
           I+  HG+        A   L   L LC WL  R +   K+ ++  QP D + Y+  F   
Sbjct: 128 IIHDHGELRRVFCYGAWLVLVHGL-LC-WLCDRRIPIVKLSMRPPQPVDDSDYRMRFCEE 185

Query: 185 LEFNAPYDALIFERADMDAPLPTANEAMALLHDRFAGEYLARF-SESRVTHKARQVLCRL 243
           +E+ A   + +FE++ +   +     ++          +L ++ ++   +   R+ L  L
Sbjct: 186 IEWRADRTSAVFEKSFLAYKVCQTPVSLPAFLKGTPSNFLVKYRNDDSTSIMIRRRLKLL 245

Query: 244 LPQGEPKREVVAQALHLSQRTLQRRLQEEGTSFQTLLDDTRRELAEQYLAQPSMTLLEIA 303
            P   P+ + +A+ L +S  TLQRRL  EG ++Q L D+ RR+++   L +  MT+  +A
Sbjct: 246 SPHTWPELDELARDLSMSSSTLQRRLYAEGFTYQRLKDNLRRDISISLLCRAGMTVDGVA 305

Query: 304 YLLGFADPSNFFRAFRRWFDATPGEYRARLL 334
             +GF + S F RAF++W   TPG YR  LL
Sbjct: 306 SEVGFIETSAFHRAFKKWTGITPGAYRRSLL 336