Pairwise Alignments

Query, 352 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 340 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  116 bits (290), Expect = 1e-30
 Identities = 86/306 (28%), Positives = 140/306 (45%), Gaps = 5/306 (1%)

Query: 28  LFKQLGLDYAALSDPDARFPQDSMTRLWQRAVELSGNPAIGLNMGKVVRPASFHVAGYAL 87
           L  + G+    L  P+AR   +S  RLW+       +    ++  + +   S      A 
Sbjct: 29  LLARAGIAVEQLHLPEARVSAESYARLWRLLARRCNDEFFAMDT-RGLCSGSLAFMCRAS 87

Query: 88  MSSNTLAEGFMRLVRYQRIIAESADLSFRLVPEGYALILTVHGDHLPPTRQSAEASLASA 147
           M   TL  G    + +  ++ +  D+   LV +     + ++     P R     +    
Sbjct: 88  MGQPTLGAGLETSLAFLSLMLQ--DMQPSLVRQQGLAEIVINEPRDEPRRAFTYFTFWMI 145

Query: 148 L-ALCGWLTGRTLQPRKVVLQGEQPADLAPYKQAFHAPLEFNAPYDALIFERADMDAPLP 206
           +  +  WL GR +    + L+  +P     Y+  F   L F  P   +I     +D PL 
Sbjct: 146 VHGVTCWLAGRRIPILSIDLRCAEPPFCDDYRVMFSENLHFERPRTRMIIASQYLDLPLR 205

Query: 207 TANEAMALLHDRFAGEYLARFSE-SRVTHKARQVLCRLLPQGEPKREVVAQALHLSQRTL 265
            + E +        G  L ++ + + +  + R  L RL P+  P  + +A+ L LS  TL
Sbjct: 206 RSEEELQRFLAEAPGNILVKYRDPASLGRRIRTDLLRLAPEQWPDADRLARQLCLSPSTL 265

Query: 266 QRRLQEEGTSFQTLLDDTRRELAEQYLAQPSMTLLEIAYLLGFADPSNFFRAFRRWFDAT 325
           +RRL EEG ++Q L D  RRELA  +L+Q  + + E+A  LGFAD S+F++AFR+WF   
Sbjct: 266 RRRLAEEGQNYQGLKDSVRRELAIAWLSQEDVAMGELAERLGFADSSSFYKAFRKWFGCN 325

Query: 326 PGEYRA 331
           PG YRA
Sbjct: 326 PGHYRA 331