Pairwise Alignments

Query, 897 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  404 bits (1039), Expect = e-116
 Identities = 225/562 (40%), Positives = 332/562 (59%), Gaps = 15/562 (2%)

Query: 336  RRTATSALHLFQRAVEQSANAFLLVNCDGVVEYVNPSFTAITQYSAEEVHGHRLAQLPAL 395
            +R A   L +     E S +A L+ +  G +   N +F+ ++ Y+  EV    L QLP +
Sbjct: 708  QRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSEV----LDQLPGM 763

Query: 396  ENLSEL----LFDAPSSLAKSNSWQGEFKSRRKNLEPYWGQLSISKVYGDNRELTHYIGI 451
              + E     L      L +  SW+GE   +R++ + Y   + I+ V  D  +L  Y+  
Sbjct: 764  LTVDEQQEGHLRYVVKQLHQRGSWEGEVWLKRRDGDHYPAWVGITAVLDDEGDLASYVCF 823

Query: 452  YEDITQTKLAQQRIERLAYTDNLTNLGNRPAFIRNLDERF--ARDSDSPISLLLVDIDNF 509
            + DI++ K ++QRI RLAY D LT+L NR  F   L      A    + + L+ +D+D F
Sbjct: 824  FTDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDLDRF 883

Query: 510  KRINDSLGHQTGDKLLISLARRLRNSLSTGGSLARFASNEFAVLLD-----DTDLESGQQ 564
            K INDSLGH  GD++L  +A RL   +    ++AR   +EF +LL      +  L     
Sbjct: 884  KPINDSLGHAAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLLLQPRPTREMALNRAIH 943

Query: 565  VASQLLATLDKPMFVDNQLISVTGSVGLACAPLHGRDPQTLMRNAGLALHKAKANGKHQV 624
            VA  +L +L +P  ++N+   VT S+G+A +P  G +   LM+NA  A++ AK  GK+  
Sbjct: 944  VAENILGSLVRPFVLENREFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGKNNF 1003

Query: 625  QVFTEALNAEASYKLFVENNLRRALTQNELDVFYQPKLCLRSGRLLGMEALLRWNHPEKG 684
            Q +   +NA A  +L +E++LR A+ QNE  ++YQP+      RL G EALLRW HP +G
Sbjct: 1004 QFYQAEMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRG 1063

Query: 685  MIRPDQFISVAEETGLIIPIGKWIARQACRMSKQLSASGMGNLQVAINLSPKQFSDPDLV 744
            ++ P  FI V EE GL++ +G W+ R+A R  K    + +   +V++N+S +QFSD  L 
Sbjct: 1064 LVPPGDFIPVIEELGLVVDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFSDGQLG 1123

Query: 745  ASIASILKEEQLPANLLELELTEGLLLEATEDTRLQLDQLKSLGLTLAMDDFGTGYSSLS 804
              IA+IL+E  LP   LELELTE +L+    +    L  LK+LGL++A+DDFGTGYSSL+
Sbjct: 1124 TRIANILEESGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLN 1183

Query: 805  YLKKFPIDIIKIDRSFIHEIPDNQDDMEITSAVIAMAHNLKLKVVAEGIETAEQLAFLRR 864
            YLK+FPID++KIDR+F+  +P+ + D +I  A+IAMAH+L L V+AEG+ET EQL FLR 
Sbjct: 1184 YLKQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLRE 1243

Query: 865  HRCDVGQGYLFDRPIPGAELLA 886
            H CD  QGYLF RP+P  +  A
Sbjct: 1244 HGCDEVQGYLFGRPMPAHQFEA 1265



 Score = 27.3 bits (59), Expect = 0.006
 Identities = 33/167 (19%), Positives = 73/167 (43%), Gaps = 18/167 (10%)

Query: 366 VEYVNPSFTAITQYSAEEVHGH-------RLAQLPALENLSELLFDA---PSSLAKSNSW 415
           + YV+PS  ++  Y A+ +  +         AQL  + +L E +  A   P+ +A+  S 
Sbjct: 602 LNYVSPSVQSVLGYQADWIFANGWQSIVANPAQLTGIYSLMERVSKAMGDPAQMAQLCSQ 661

Query: 416 QGE----FKSRRKNLEPYWGQLSISKVYGDNRELTHYIGIYEDITQTKLAQQRIERLA-- 469
                  F   R +      +L +  V+ D++     +G+  DI+Q + A++ +   A  
Sbjct: 662 LPTQLFLFDCLRADGRKIPIELRLVLVWDDDQRFEGVLGVGRDISQQRRAEKDLRMAATV 721

Query: 470 --YTDNLTNLGNRPAFIRNLDERFARDSDSPISLLLVDIDNFKRIND 514
             ++ +   + +   +I   +E F+R S   +S +L  +     +++
Sbjct: 722 FEHSTSAILITDPAGYIVQANEAFSRVSGYAVSEVLDQLPGMLTVDE 768