Pairwise Alignments

Query, 419 a.a., D-mannose isomerase (EC 5.3.1.7) (from data) from Pseudomonas simiae WCS417

Subject, 377 a.a., Cellobiose 2-epimerase from Pseudomonas sp. DMC3

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 79/286 (27%), Positives = 115/286 (40%), Gaps = 38/286 (13%)

Query: 50  LPADAHAETMNTARMTHSFAMAHALGLPGYAELVAHGV-AALSGALRDSEHGGWFAAPHA 108
           LPA  +   M  AR  + F+    +G+   AE+ A  +  +L     D+EHGGWF   ++
Sbjct: 55  LPAQRY-RAMACARQLYLFSSL--IGVVDNAEVRAAALFRSLQRHFHDAEHGGWF---YS 108

Query: 109 LDG-----NRGKAAYLHAFVALAASSAVVAGAPG-ASTLLNDAIHIIDHFFWSEEEGVML 162
           +D      ++ K  Y HAF+  A +          A + LN A+ II   F +  +G+  
Sbjct: 109 IDAQGKPLDQRKDLYTHAFILFACAHYWDKSRDSLAESTLNAALEIIGRRF-ATGDGLYE 167

Query: 163 ESFAQDWSGVEAYRGANSNMHATEAFLALADVTGDTRWLDRALRIVERVIHTHAAGNQFM 222
               +DW  ++     N  MH  EAFLA   V  D +   +AL  +   +H      Q+ 
Sbjct: 168 ACLERDWLTLQTGPLQNPLMHLAEAFLATLAVREDPQ-TQKALLELCTAMHKQFVDPQYC 226

Query: 223 VIEHFDTHWHPLLGYNEDNPADGFRPYGITPGHGFEWARLVLHLEAARLQAGLVTPEWLV 282
           V+        PL          G       PGH FEW  L   LE+    + L+    L 
Sbjct: 227 VLME-----KPL----------GAVDNWYEPGHQFEWYFL---LES----SALLRDSKLY 264

Query: 283 ADAKRLFASACEY-AWSVDGAPGIVYTLDWNHRPVVRERLHWTHAE 327
               R FA   +Y      GA   +  LD N RP    +  W  AE
Sbjct: 265 RALDRAFAFTEQYGVLESCGAVRAMLDLDGNGRPRDSTQRIWAQAE 310



 Score = 24.3 bits (51), Expect = 0.007
 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 5/38 (13%)

Query: 356 ETHFIDRLHGSWHHELSPHNQPSSNIWGGKPDLY-HAW 392
           + HF D  HG W + +    +P       + DLY HA+
Sbjct: 94  QRHFHDAEHGGWFYSIDAQGKPLDQ----RKDLYTHAF 127