Pairwise Alignments

Query, 278 a.a., lactate dehydrogenase from Pseudomonas simiae WCS417

Subject, 321 a.a., 23S rRNA (adenine(2030)-N(6))-methyltransferase (EC 2.1.1.266) from Variovorax sp. SCN45

 Score =  150 bits (380), Expect = 3e-41
 Identities = 103/307 (33%), Positives = 139/307 (45%), Gaps = 43/307 (14%)

Query: 2   NYRHAFHAGNHADVFKHLTLTRLIALMSRKEQPFAYLDTHAGIGLYDLQGDQANRTGEYL 61
           +YRHAFHAGNHADV KH  L   +  +  K+     +DTHAG GLY L GD A  +GE  
Sbjct: 3   SYRHAFHAGNHADVLKHTVLIATLDHLLEKDAALTVVDTHAGAGLYRLDGDYAGTSGEAA 62

Query: 62  EGIARLW---------------------------GESDLPPLTADYMRVLHEMNPDGELR 94
           EGI RL                             E+ L    A Y+ V+ + N  G  R
Sbjct: 63  EGILRLLSGKKEPAAPASAPAPAAKSAAKKAAPEAEAPLADAIARYLGVISDFNSKGGAR 122

Query: 95  YYPGSPELARRLTRPQDRVLLNEKHPEDGVLLKDN---MKGDRRVKVHLGEGWHVPRALL 151
            YPGSP + + L R  D++ L E HP D   L  N   ++  R++ V L +G+      L
Sbjct: 123 VYPGSPFIIQHLLRDHDKLKLFELHPTDSRTLSANIAQLEAGRQIAVLLEDGFGSATKFL 182

Query: 152 PVPEKRALMLIDPPFEKLDEMQRCAASLKEAVGRMRQTVAAIWYPV---KDQRMLRRFYQ 208
           P P +RAL+L+DP +E   +  R      EA+ R      AIWYP+    +   L R  +
Sbjct: 183 PPPSRRALVLMDPSYEMKTDYGRVLDFAAEALKRFATGTYAIWYPIIPRPEAHDLPRRLK 242

Query: 209 DLAGTGAPKLLRVELLVHPLDTPNT----------LTGSGLAIANPPWGLEEELRELLPW 258
            +A       L   L V                  L  SG+ + NPP+ L+  L E LP 
Sbjct: 243 TMATKAGKSWLHATLTVKSSKITKDAASGETQRPGLPASGMFLINPPYTLKPLLAEALPQ 302

Query: 259 LSKKLGQ 265
           L ++LGQ
Sbjct: 303 LVERLGQ 309