Pairwise Alignments

Query, 563 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) from Pseudomonas simiae WCS417

Subject, 573 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Sphingobium sp. HT1-2

 Score =  337 bits (865), Expect = 6e-97
 Identities = 201/519 (38%), Positives = 304/519 (58%), Gaps = 14/519 (2%)

Query: 46  LGKTITYGELYELSGAFAAYLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNT 105
           +G+  +YG + +     A  LQ    +K GDR+ + LPN   Y  A +GA+ AG IVVN 
Sbjct: 47  MGRKFSYGAMMDDIRRIACGLQA-MGVKKGDRVGLYLPNTPHYVAAYYGALLAGTIVVNF 105

Query: 106 NPLYTAREMEHQFNDSGAKALVCLANMAHL--AEKVVPKTAVKHVIVTEVADLLPPLKRL 163
           +PLYT  E+EHQ  DSG K L  L+  A L  A KV+  ++++ ++V  +A++LP  K +
Sbjct: 106 SPLYTVAELEHQVEDSGTKILFTLSAKALLPTALKVLDNSSLEKLVVGSIAEVLPTAKSI 165

Query: 164 LINSVIKYVKKMVPAYHLPNAIKFNDVLAKGHGQPVSDASPTSSDVAVLQYTGGTTGVAK 223
           L     +   +  P  H P  I+++ ++A      V+D  P + DVA+LQYTGGTTG  K
Sbjct: 166 LFRLFKR--GETTPLPHDPRVIRYDRLIANAGECIVADIDPVN-DVALLQYTGGTTGTPK 222

Query: 224 GAMLTHRNLVANMLQCKALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILI 283
           GAMLTH+NL AN  Q +A+   +  EG + +I  LP +H++A T  C     + N   ++
Sbjct: 223 GAMLTHQNLTANARQAQAI-DPHAGEGDDRIIAVLPFFHVFANT--CTLNRTVMNGGEMV 279

Query: 284 SNPR-DLPAMVKELSKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKVTLSGGMALQLAA 342
             PR +   ++  + + K +   G+ T++ AL ++ A   +DFS+L+  +SGG  L +  
Sbjct: 280 MLPRFEAVQVLSAVQRTKATSLPGVPTMYQALLDHPALPNIDFSSLRTCISGGAPLPMEV 339

Query: 343 AERWKAVTGCGICEGYGMTETSPVATVNPIQHI-QIGTIGIPVPSTVCKVIA-DDGTELA 400
            ++++AVTG  + EGYG+TETSP+   NP + + + GT+G PVP T  K+++ +D T+  
Sbjct: 340 KQKFEAVTGARLIEGYGLTETSPIVCANPYEGLNKTGTVGQPVPGTRVKIVSREDPTQPP 399

Query: 401 L-GETGELCVKGPQVMKGYWQRQDATDEMLDSEGWLKTGDIAIIQPDGYMRIVDRKKDMI 459
             GE GEL   GPQ+MKGYW R DA  ++   E +L+TGD+  +  DGY+RIVDR KDMI
Sbjct: 400 PEGEPGELMFAGPQIMKGYWNRPDADAQVFVGE-FLRTGDVGEVDDDGYVRIVDRLKDMI 458

Query: 460 LVSGFNVYPNELEDVLAGLPGVLQCAAIGVPDEKSGEHIKLFIVVKPGATLTKEQVMEHM 519
            V GF V+P+++E VL     V +   IGVPD   GE  K F+ +  GAT+    + + +
Sbjct: 459 AVGGFKVFPSQVESVLYHHESVKEALVIGVPDRYRGEQPKAFVTLNEGATIDGPGLKDWL 518

Query: 520 RANVTAYKVPKAVEFRDALPTTNVGKILRRELRDEELKK 558
              +  ++    VE R +LP T VGK+ R+EL  EE  K
Sbjct: 519 NPQLGKHERVCEVEVRASLPKTLVGKLSRKELVAEERAK 557