Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 351 a.a., Transcriptional regulator, LacI family from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  187 bits (474), Expect = 5e-52
 Identities = 113/336 (33%), Positives = 185/336 (55%), Gaps = 5/336 (1%)

Query: 8   KKLRTTGRPTLNEVARLAGVSPITASRALRGISTVATELVEKVQQAAAELKYVVNPAARA 67
           K+ ++   PTL +VAR AG+SP+T SRAL     V  + VEKV QA     Y+ N  A  
Sbjct: 19  KRTKSPRAPTLEDVARSAGLSPMTVSRALNSPQLVRPKTVEKVMQAVRVTGYIPNALAGG 78

Query: 68  LASAQSHSVVVLVPSLSNLLFIETLEAIHQVLRPKGFEVLIGNSHYSRDEEENLLRNYMA 127
           LAS +S  + V+VP ++N +F++T++++   L  +G+ +L+  + Y+   E  L+   ++
Sbjct: 79  LASRRSKLIAVVVPQINNNMFVDTIQSLSDELARRGYHILLCVAGYTEQTEAELVATLLS 138

Query: 128 YQPRGLLLTGFDRTESARRMVEASNVPCVYMMDLDPNAGVNCVGFSQLAAGETAAAHLLS 187
            +P G++LTG   T   ++++  + +P V + DL P      VGFS    G+    +LLS
Sbjct: 139 RRPDGVVLTGIHHTIELKKVILNAAIPVVEIWDLTPTPLDMLVGFSHEKVGQATGEYLLS 198

Query: 188 RGRKRLAYIGAQLDQRTLLRGEGFRRALQQAGLYD-PALELLTPRPSSVGLGGELFLQLL 246
           +G +R   +    D+R   R +G    LQ+  ++  P +++  P   S+G  G   L  L
Sbjct: 199 KGYRRPGLLWT-ADRRAAQRKQGLCSVLQRHAIHAVPQVDVPLPASLSLGRSG---LSQL 254

Query: 247 AAHPDVDAIFFGNDDLAQGALLEALRHGIKVPERVAVLGFNDLPASSFMVPRLSSISTPR 306
                 D I   +D LAQGA++EA   G+++P  +AV+GF DL  ++   P ++++S  R
Sbjct: 255 FDEGTFDVIVCSSDTLAQGAMMEAESRGLRIPHDLAVIGFGDLDFAASNRPSITTVSVDR 314

Query: 307 EAIGRRAAEQLLTIMAGNKIAKPVVDMGFELQVRES 342
            AIG+RAA  L   +     A+ +VD+GF L  RES
Sbjct: 315 RAIGQRAATLLADRIEQKPCAEAIVDIGFHLIGRES 350