Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 332 a.a., DNA-binding transcriptional repressor, 5-gluconate-binding (NCBI) from Escherichia coli BW25113

 Score =  181 bits (460), Expect = 2e-50
 Identities = 110/325 (33%), Positives = 182/325 (56%), Gaps = 5/325 (1%)

Query: 15  RPTLNEVARLAGVSPITASRALRGISTVATELVEKVQQAAAELKYVVNPAARALASAQSH 74
           R +L ++A LAGV+ +T SR +R    VA E  E++ +   E+ Y+ N A   L +AQS+
Sbjct: 5   RISLQDIATLAGVTKMTVSRYIRSPKKVAKETGERIAKIMEEINYIPNRAPGMLLNAQSY 64

Query: 75  SVVVLVPSLSNLLFIETLEAIHQVLRPKGFEVLIGNSHYSRDEEENLLRNYMAYQPRGLL 134
           ++ +L+PS  N LF + L  I  V     ++ LI N +Y RD EE  + N ++Y   G++
Sbjct: 65  TLGILIPSFQNQLFADILAGIESVTSEHNYQTLIANYNYDRDSEEESVINLLSYNIDGII 124

Query: 135 LTGFDRTESARRMVEASNVPCVYMMDLDPNAGVNCVGF-SQLAAGETAAAHLLSRGRKRL 193
           L+    T    + + ++ +P V +MD+        VGF ++ AA +     L  R R ++
Sbjct: 125 LSEKYHTIRTVKFLRSATIPVVELMDVQGERLDMEVGFDNRQAAFDMVCTMLEKRVRHKI 184

Query: 194 AYIGAQLDQRTLLRGEGFRRALQQAGLYDPALELLTPRP-SSVGLGGELFLQLLAAHPDV 252
            Y+G++ D R   R +G+  A+    L++ +   + PR  SS+ LG +L    L+A+PD+
Sbjct: 185 LYLGSKDDTRDEQRYQGYCDAMM---LHNLSPLRMNPRAISSIHLGMQLMRDALSANPDL 241

Query: 253 DAIFFGNDDLAQGALLEALRHGIKVPERVAVLGFNDLPASSFMVPRLSSISTPREAIGRR 312
           D +F  NDD+A GALL      + VPE++++ GF+ L     M+P L+S+ TPR  IGR 
Sbjct: 242 DGVFCTNDDIAMGALLLCRERNLAVPEQISIAGFHGLEIGRQMIPSLASVITPRFDIGRM 301

Query: 313 AAEQLLTIMAGNKIAKPVVDMGFEL 337
           AA+ LL+ +  N      VD+G+++
Sbjct: 302 AAQMLLSKIKNNDHNHNTVDLGYQI 326