Pairwise Alignments

Query, 154 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 145 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 92.8 bits (229), Expect = 2e-24
 Identities = 46/128 (35%), Positives = 78/128 (60%), Gaps = 1/128 (0%)

Query: 5   KSITERVCQALGFEGLALLICTPLLVWITGRPALEMGAVTLGLSLLALTWNIIFNSLFDR 64
           + +  RV     +EG+A++  +  L  +T       G + +  S++A+ WN+ FN+LF+R
Sbjct: 2   QGLRRRVVYISLYEGIAIVAASAGLALMTDAGLGHSGVLAVAASVIAVLWNLAFNALFER 61

Query: 65  LKVRLQLSGGGWTR-VLHALMFEGGLIIVAVPLIAAWLNISLMQAFMLDIGVLLFFLPYT 123
            + R  + G    R + HA+ FEGGLI   VP+ A  L +SL QA ++D+G+++FFL YT
Sbjct: 62  WESRQAVRGRSVRRRIAHAIGFEGGLIAFLVPMFAWGLGVSLWQALVMDLGLVVFFLVYT 121

Query: 124 YVYHWGYD 131
           +V++W +D
Sbjct: 122 FVFNWAFD 129



 Score = 42.0 bits (97), Expect = 4e-09
 Identities = 19/61 (31%), Positives = 31/61 (50%)

Query: 5   KSITERVCQALGFEGLALLICTPLLVWITGRPALEMGAVTLGLSLLALTWNIIFNSLFDR 64
           +S+  R+  A+GFEG  +    P+  W  G    +   + LGL +  L +  +FN  FDR
Sbjct: 71  RSVRRRIAHAIGFEGGLIAFLVPMFAWGLGVSLWQALVMDLGLVVFFLVYTFVFNWAFDR 130

Query: 65  L 65
           +
Sbjct: 131 V 131