Pairwise Alignments

Query, 252 a.a., short-chain dehydrogenase from Pseudomonas simiae WCS417

Subject, 294 a.a., Cyclic-di-GMP-binding biofilm dispersal mediator protein from Variovorax sp. SCN45

 Score =  126 bits (316), Expect = 6e-34
 Identities = 82/251 (32%), Positives = 127/251 (50%), Gaps = 18/251 (7%)

Query: 4   KIALITGASRGLGKSAALHLAAQGVDIIGTYHSAAAEAQSVVEQVQALGGRAAMLQLDVS 63
           K+A +TG SRG+G +    LA  G  +  +Y S+AA A  +V  VQA GGRA  L++D +
Sbjct: 54  KVAFVTGGSRGIGAAIVRRLARDGAAVAFSYASSAAPADELVRAVQAEGGRAFALKIDSA 113

Query: 64  QSGTFDGFVSEVRRLLKDVFAQEHF----NFLINNAGIGAHASFVETTEAQFDQLVAIHF 119
            +      + +         A +HF    + L+NNAG+       +   A FD+ +A++ 
Sbjct: 114 DADALKAGIDQ---------AAKHFGGRIDILVNNAGVLHLGPVEQFPLADFDRTIAVNV 164

Query: 120 KAPFFLTQKLLPLISDGGRIINI-SSGLARFSLPGYAAYASMKGAVEVLSRYQAKELGPR 178
           +A F   Q  L  +  GGRI+NI S+   R    G + YA  K A+  L +  A++LGPR
Sbjct: 165 RAVFVAIQAALAHMGTGGRIVNIGSTNAERMPFAGGSVYAMSKSALTGLVQGLARDLGPR 224

Query: 179 GITVNTLAPGAIATDFGGGAVRDNSDLNAMVANNTALGRAGLPDDIGGAISTLLADGSNW 238
           GITVN + PG + TD        +  + A +    A+ R G  D+I G ++ L    + +
Sbjct: 225 GITVNNVQPGPVDTDMNPA----SGPMAATMHGFMAIDRHGHADEIAGMVAYLAGPEAAF 280

Query: 239 ITGQRIEASGG 249
           +TG  +   GG
Sbjct: 281 VTGAGLNIDGG 291