Pairwise Alignments

Query, 439 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 432 a.a., Chemotaxis regulator BdlA from Alteromonas macleodii MIT1002

 Score =  284 bits (727), Expect = 3e-81
 Identities = 167/408 (40%), Positives = 235/408 (57%), Gaps = 6/408 (1%)

Query: 24  LDAIERSMAVIEFDLHGNVLRANANFLQAMGYRAEQIEGQSHRMFCTPAFARSAEYNQLW 83
           LDA + +MA   +   G    A+   L  + Y        SH           ++Y   W
Sbjct: 26  LDAFKSTMAYAIYSTDGQCTFASPVLLSILDYPNSTATSFSHAAMRVEGVEPESQYKSFW 85

Query: 84  SNLRNGQYQSGTFERVAGDGQSVWLEASYNPVRDDAGHVIKVVKYAMDVTPRLQAESEAN 143
            +L NG   S T  R +  G++ WL+ASY  V       I  + +  D+T    A     
Sbjct: 86  QHLVNGGSFSDTVARKSALGETKWLKASYVAVNKHGVTEIHAIYH--DITEHENAYFAGK 143

Query: 144 AKLAAISRAMAVIEFNLDGTIITANANFLQRMGYTLAQVQGQHHRLFCT-KALANSPAYE 202
           A   A++++MAVIEF+ DGTIITAN NF   + Y+LA +QG+HHR+FC  K    +P   
Sbjct: 144 AVTDALNKSMAVIEFHPDGTIITANENFTATVKYSLADIQGKHHRMFCRDKFYQENP--- 200

Query: 203 DFWRRLNQGEMFSGQFERVDKNGQAVWLEANYNPVYDAGGRLCKVVKFASDVTAMVQQHT 262
           +FW  L +G   SGQFERVD +G A+WLEA YNPV+DA GR+ KV+KFAS++T  + +  
Sbjct: 201 NFWDNLARGNFSSGQFERVDAHGNALWLEATYNPVFDASGRVVKVIKFASNITDAINEKN 260

Query: 263 ADAASAAQAYHISLNTRDIAEKGAEVIQQTASGMRDIAADIDGSSQLIAKLGERSQQITA 322
           A A +A  A   +  T  IA +GA  +Q++         +++ ++QL+ +L E+S +I  
Sbjct: 261 AIAQAAELAVSTAEETSQIAHEGASSLQRSVEIFNTAMLEVEQTNQLMHELSEQSLKIET 320

Query: 323 IVNTIRGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLAARTSGSTAEISSMIAM 382
           IV TI GIA+QTNLLALNAAIEAARAG+QGRGFAVVADEVRQLA RTS ST EI S++A 
Sbjct: 321 IVTTISGIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRQLAQRTSDSTVEIESVVAE 380

Query: 383 IQDETRQAIHSMDGTRDRAAQGVDLANRAGTVILQIREGTSDAVQAVS 430
            +    ++   M G +D   Q      +  ++I +I++G  +  + VS
Sbjct: 381 NRKLADKSTKKMAGVKDSVDQNSQQIAQVQSIIDEIQKGALNVSETVS 428



 Score =  113 bits (283), Expect = 1e-29
 Identities = 64/162 (39%), Positives = 91/162 (56%), Gaps = 13/162 (8%)

Query: 4   NAHKKT-IDSLQHTLAQHAS-------LLDAIERSMAVIEFDLHGNVLRANANFLQAMGY 55
           N H  T I ++ H + +H +       + DA+ +SMAVIEF   G ++ AN NF   + Y
Sbjct: 118 NKHGVTEIHAIYHDITEHENAYFAGKAVTDALNKSMAVIEFHPDGTIITANENFTATVKY 177

Query: 56  RAEQIEGQSHRMFCTPAFARSAEYNQLWSNLRNGQYQSGTFERVAGDGQSVWLEASYNPV 115
               I+G+ HRMFC   F +  E    W NL  G + SG FERV   G ++WLEA+YNPV
Sbjct: 178 SLADIQGKHHRMFCRDKFYQ--ENPNFWDNLARGNFSSGQFERVDAHGNALWLEATYNPV 235

Query: 116 RDDAGHVIKVVKYAMDVTPRLQAESEANAKLAAISRAMAVIE 157
            D +G V+KV+K+A ++T    A +E NA   A   A++  E
Sbjct: 236 FDASGRVVKVIKFASNIT---DAINEKNAIAQAAELAVSTAE 274



 Score = 40.0 bits (92), Expect = 1e-07
 Identities = 27/115 (23%), Positives = 42/115 (36%)

Query: 127 KYAMDVTPRLQAESEANAKLAAISRAMAVIEFNLDGTIITANANFLQRMGYTLAQVQGQH 186
           +Y  D++            L A    MA   ++ DG    A+   L  + Y  +      
Sbjct: 7   RYNNDISALRDESQGLLGTLDAFKSTMAYAIYSTDGQCTFASPVLLSILDYPNSTATSFS 66

Query: 187 HRLFCTKALANSPAYEDFWRRLNQGEMFSGQFERVDKNGQAVWLEANYNPVYDAG 241
           H     + +     Y+ FW+ L  G  FS    R    G+  WL+A+Y  V   G
Sbjct: 67  HAAMRVEGVEPESQYKSFWQHLVNGGSFSDTVARKSALGETKWLKASYVAVNKHG 121