Pairwise Alignments

Query, 349 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 493 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  125 bits (314), Expect = 2e-33
 Identities = 79/193 (40%), Positives = 111/193 (57%), Gaps = 16/193 (8%)

Query: 154 MLTLYPMAIGMVCYELAIKLSEHKRALSALSRTDSLTGLLNHGSWKDLLHLKFHKCQQQQ 213
           M+TL  +A+      +   +  H+ +  AL+  DSLTGL N  S+  L      + ++  
Sbjct: 305 MITLVVLAL------VHAMVRRHQASTEALATLDSLTGLYNRRSFDLLAAQALREARRDS 358

Query: 214 SHATIALIDIDHFKQINDTHGHIVGDAVLRQLSLELRRNLRENDLAGRYGGDEFCVILPQ 273
           S     LID+DHFK +ND HGH+ GD VLRQ +  L+ +LR++D+  R+GG+EF V+L +
Sbjct: 359 SPLVALLIDLDHFKALNDNHGHLAGDEVLRQFANVLQGSLRQSDILCRWGGEEFIVLLRE 418

Query: 274 MPMEQAAQVMERMRE-----TFSNYRNPQIPELRVSLSIGLADFQPVFTDAAMWLNAADR 328
               QA +V E++R      TFS    P    LR++ SIGL+  QP  T  A+ L  ADR
Sbjct: 419 AEGRQAIEVAEKIRRRTEQLTFSYDNQP----LRLTTSIGLSSLQPGDTLHAL-LTRADR 473

Query: 329 ALYAAKDTGRNRV 341
           ALY AK  GRNRV
Sbjct: 474 ALYRAKQAGRNRV 486